RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 EPC2Q52LR7 807 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 ZNF484Q5JVG2 852 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 Q6ZUG5 572 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 SMAP1Q8IYB5 467 aaPredicted RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 REXO1Q8N1G1 1221 aaKnown RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 GDPD5Q8WTR4 605 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
CDCP1-203ENST00000490471 ZNF302Q9NR11 478 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 PCDHB8Q9UN66 801 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
CDCP1-203ENST00000490471 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 CPLX1O14810 134 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 CHRNA1P02708 482 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 PSAPP07602 524 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 CYP3A4P08684 503 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 TMOD1P28289 359 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 KRT76Q01546 638 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 PAK2Q13177 524 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 BTG3Q14201 252 aaPredicted RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 FBXO47Q5MNV8 452 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 PDXDC2PQ6P474 469 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 TMCO2Q7Z6W1 182 aaPredicted RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 BRF1Q92994 677 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 FAM167AQ96KS9 214 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 ZNF577Q9BSK1 485 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 CELF4Q9BZC1 486 aaKnown RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 ZMYND12Q9H0C1 365 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
CDCP1-203ENST00000490471 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 SIP14410 1827 aa12.88□□□□□ -0.35
CDCP1-203ENST00000490471 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 EPOPA6NHQ4 379 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 IPO5O00410 1097 aaKnown RBP12.87□□□□□ -0.35
CDCP1-203ENST00000490471 ENPP3O14638 875 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 GPR182O15218 404 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 MAGEB2O15479 319 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 ATG7O95352 703 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 XBP1P17861 261 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 HSPA4P34932 840 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 CTNNB1P35222 781 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 LPIN1Q14693 890 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 PLCB4Q15147 1175 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
CDCP1-203ENST00000490471 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 BANK1Q8NDB2 785 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
CDCP1-203ENST00000490471 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
CDCP1-203ENST00000490471 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
CDCP1-203ENST00000490471 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.86□□□□□ -0.35
CDCP1-203ENST00000490471 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 LPXNO60711 386 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 ARP10275 920 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 KLRC1P26715 233 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 ADD1P35611 737 aaKnown RBP12.86□□□□□ -0.35
CDCP1-203ENST00000490471 BMPR1AP36894 532 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
CDCP1-203ENST00000490471 USP11P51784 963 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 NLRP5P59047 1200 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 CDC42EP1Q00587 391 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 TFF2Q03403 129 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
CDCP1-203ENST00000490471 MGAT3Q09327 533 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 MTHFD1LQ6UB35 978 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 EP400NLQ6ZTU2 488 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 KCNB2Q92953 911 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 PCDHB7Q9Y5E2 793 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 KDM3AQ9Y4C1 1321 aa12.86□□□□□ -0.35
CDCP1-203ENST00000490471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
CDCP1-203ENST00000490471 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 C5orf67F2Z3F1 127 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 DDX39AO00148 427 aaKnown RBP12.85□□□□□ -0.35
CDCP1-203ENST00000490471 RPS6KA5O75582 802 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 CDC27P30260 824 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 SFNP31947 248 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 KCNQ1P51787 676 aa12.85□□□□□ -0.35
CDCP1-203ENST00000490471 FUT2Q10981 343 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms