RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 EPHA7Q15375 998 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 BADQ92934 168 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 HSD17B14Q9BPX1 270 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 PRKAG2Q9UGJ0 569 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 NOD1Q9Y239 953 aa16.17■□□□□ 0.18
SRGAP3-208ENST00000490348 HBP1O60381 514 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 SLITRK3O94933 977 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 OATP04181 439 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 RAG1P15918 1043 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 PSMC5P62195 406 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 CYP4A11Q02928 519 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 PTK7Q13308 1070 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 PRPF38BQ5VTL8 546 aaKnown RBP16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 TRAF7Q6Q0C0 670 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 CKAP2LQ8IYA6 745 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 VWCEQ96DN2 955 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 DYDC2Q96IM9 177 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 GDF15Q99988 308 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 EIF2AK1Q9BQI3 630 aaKnown RBP16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 LXNQ9BS40 222 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
SRGAP3-208ENST00000490348 KAT6AQ92794 2004 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 LAD1O00515 517 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 P4HBP07237 508 aaKnown RBP16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 PRPHP41219 470 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 CCL23P55773 120 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 RBL2Q08999 1139 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 CTTNQ14247 550 aaKnown RBP16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 ANO5Q75V66 913 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 IGSF22Q8N9C0 903 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 CEP89Q96ST8 783 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 PRO3102Q9H379 93 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 TUBE1Q9UJT0 475 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 CDH23Q9H251 3354 aa16.15■□□□□ 0.18
SRGAP3-208ENST00000490348 PITPNM1O00562 1244 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 ZBTB39O15060 712 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 SPATA31C1P0DKV0 1188 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 GNAT1P11488 350 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 CKBP12277 381 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 EPHB4P54760 987 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 PTPAQ15257 358 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 TARBP2Q15633 366 aaKnown RBP16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 SCLYQ96I15 445 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 FAM167AQ96KS9 214 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 SH2D3AQ9BRG2 576 aa16.14■□□□□ 0.17
SRGAP3-208ENST00000490348 RRN3P2A6NIE6 340 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 MED24O75448 989 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 C22orf31O95567 290 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 F13A1P00488 732 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 CSF2RAP15509 400 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 GPNMBQ14956 572 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 XKR3Q5GH77 459 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 MTHFD1LQ6UB35 978 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 CAGE1Q8TC20 777 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 NIFKQ9BYG3 293 aaKnown RBP16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 COL1A2P08123 1366 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 PP2D1A8MPX8 630 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 BRD1O95696 1058 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 KLRC1P26715 233 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 DDIT3P35638 169 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 GRIN1Q05586 938 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 PDIA5Q14554 519 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 MBTPS1Q14703 1052 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 ECM1Q16610 540 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 ZNF618Q5T7W0 954 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 C16orf59Q7L2K0 433 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 CATSPER3Q86XQ3 398 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 TPH2Q8IWU9 490 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 SEPT9Q9UHD8 586 aaPredicted RBP16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 PCDHA2Q9Y5H9 948 aa16.13■□□□□ 0.17
SRGAP3-208ENST00000490348 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 A0A087WWV3 80 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 IQCF3P0C7M6 154 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 CDC25AP30304 524 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 THPOP40225 353 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 NPEPPSP55786 919 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 BFSP2Q13515 415 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
SRGAP3-208ENST00000490348 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms