RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 POLR2DO15514 142 aaKnown RBP15.52■□□□□ 0.08
C9orf3-221ENST00000489562 CABYRO75952 493 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 F2P00734 622 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 OATP04181 439 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 GJB1P08034 283 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 NDUFA8P51970 172 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 BEX3Q00994 111 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 PRKCEQ02156 737 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 LRRC41Q15345 812 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 UGCGQ16739 394 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 TPRNQ4KMQ1 711 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 COL13A1Q5TAT6 717 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-221ENST00000489562 POTEGQ6S5H5 508 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 OTUD6AQ7L8S5 288 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 PDILTQ8N807 584 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-221ENST00000489562 DEFB118Q96PH6 123 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 C16orf70Q9BSU1 422 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 MTG1Q9BT17 334 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-221ENST00000489562 GOLPH3LQ9H4A5 285 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 TUT1Q9H6E5 874 aaKnown RBP15.52■□□□□ 0.08
C9orf3-221ENST00000489562 NRBP2Q9NSY0 501 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 ANKEF1Q9NU02 776 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 OGDHLQ9ULD0 1010 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 DNM3Q9UQ16 869 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 PPME1Q9Y570 386 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 MYH11P35749 1972 aa15.52■□□□□ 0.07
C9orf3-221ENST00000489562 KIAA0100Q14667 2235 aaKnown RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 MYADML2A6NDP7 307 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 ZNF862O60290 1169 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 EYA4O95677 639 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 MYL3P08590 195 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 ZNF286BP0CG31 522 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 YWHABP31946 246 aaKnown RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 PURAQ00577 322 aaKnown RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 CCSAPQ6IQ19 270 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 TRIM50Q86XT4 487 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 CKAP2LQ8IYA6 745 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 FMR1NBQ8N0W7 255 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 ENGASEQ8NFI3 743 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 ATP8B4Q8TF62 1192 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 DHX58Q96C10 678 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 CCDC43Q96MW1 224 aaKnown RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 TIGD1Q96MW7 591 aa15.51■□□□□ 0.07
C9orf3-221ENST00000489562 WRAP73Q9P2S5 460 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 DBR1Q9UK59 544 aaKnown RBP15.51■□□□□ 0.07
C9orf3-221ENST00000489562 A0A087X0B3 334 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 KBTBD13C9JR72 458 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 DNM1LO00429 736 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 HBP1O60381 514 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 KINO60870 393 aaKnown RBP15.5■□□□□ 0.07
C9orf3-221ENST00000489562 ZNF202O95125 648 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 ASGR1P07306 291 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 SLFN14P0C7P3 912 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 NFKBIBQ15653 356 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 E2F4Q16254 413 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 KCNA10Q16322 511 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 ECM1Q16610 540 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 KANK3Q6NY19 840 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 TNS4Q8IZW8 715 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 LARP4BQ92615 738 aaKnown RBP15.5■□□□□ 0.07
C9orf3-221ENST00000489562 RAD54LQ92698 747 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 PLIN2Q99541 437 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 TMEM106CQ9BVX2 250 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 NIFKQ9BYG3 293 aaKnown RBP15.5■□□□□ 0.07
C9orf3-221ENST00000489562 PANK2Q9BZ23 570 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 LRRC27Q9C0I9 530 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 CRISPLD2Q9H0B8 497 aa15.5■□□□□ 0.07
C9orf3-221ENST00000489562 COL1A2P08123 1366 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 HAS3O00219 553 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 SGPL1O95470 568 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-221ENST00000489562 LIG1P18858 919 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 ATP4AP20648 1035 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 PSEN2P49810 448 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 ACLYP53396 1101 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 SNW1Q13573 536 aaKnown RBP15.49■□□□□ 0.07
C9orf3-221ENST00000489562 MFSD10Q14728 455 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 PLCB4Q15147 1175 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-221ENST00000489562 NAALADL2Q58DX5 795 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 EXOC8Q8IYI6 725 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 U2AF1L4Q8WU68 220 aaKnown RBP15.49■□□□□ 0.07
C9orf3-221ENST00000489562 KAT2BQ92831 832 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 SEZ6LQ9BYH1 1024 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 TNMDQ9H2S6 317 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 BLOC1S4Q9NUP1 217 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 KCND2Q9NZV8 630 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 SEPT9Q9UHD8 586 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-221ENST00000489562 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 EVPLQ92817 2033 aa15.49■□□□□ 0.07
C9orf3-221ENST00000489562 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ARHGEF35A5YM69 484 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 E9PMD0 336 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ACTN4O43707 911 aaKnown RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 NR1I2O75469 434 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 STBD1O95210 358 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms