RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
SFXN3-207ENST00000489434 IGFLR1Q9H665 355 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
SFXN3-207ENST00000489434 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 IGSF9BQ9UPX0 1349 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 hCG_1984214I3L0E3 225 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 BACH1O14867 736 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 LTBRP36941 435 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 KRT76Q01546 638 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 SMAD4Q13485 552 aaKnown RBP13.6□□□□□ -0.23
SFXN3-207ENST00000489434 PLCB4Q15147 1175 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
SFXN3-207ENST00000489434 CLUL1Q15846 466 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 FAM160B1Q5W0V3 765 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 ZNF713Q8N859 430 aaPredicted RBP13.6□□□□□ -0.23
SFXN3-207ENST00000489434 PCYT2Q99447 389 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
SFXN3-207ENST00000489434 CD207Q9UJ71 328 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 MRPL42Q9Y6G3 142 aaKnown RBP13.6□□□□□ -0.23
SFXN3-207ENST00000489434 LOXHD1Q8IVV2 1947 aa13.6□□□□□ -0.23
SFXN3-207ENST00000489434 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 ZBTB43O43298 467 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 CSPG5O95196 566 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 LINC00271P0C7V0 271 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 AP3B2Q13367 1082 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 RTN1Q16799 776 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 PAN2Q504Q3 1202 aaKnown RBP13.59□□□□□ -0.23
SFXN3-207ENST00000489434 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 APOA5Q6Q788 366 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 CYP2W1Q8TAV3 490 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 TRAPPC12Q8WVT3 735 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 AGO4Q9HCK5 861 aaKnown RBP13.59□□□□□ -0.23
SFXN3-207ENST00000489434 AAASQ9NRG9 546 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 V9GY48 417 aaPredicted RBP13.59□□□□□ -0.23
SFXN3-207ENST00000489434 KDM3AQ9Y4C1 1321 aa13.59□□□□□ -0.23
SFXN3-207ENST00000489434 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 MEIS1O00470 390 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 MBTPS2O43462 519 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 HBP1O60381 514 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 ARP10275 920 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-207ENST00000489434 NFX1Q12986 1120 aaKnown RBP13.58□□□□□ -0.24
SFXN3-207ENST00000489434 ADAM15Q13444 863 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
SFXN3-207ENST00000489434 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 NIPA1Q7RTP0 329 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 RTN4RL1Q86UN2 441 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-207ENST00000489434 KLHL23Q8NBE8 558 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 LINC01599Q8WXQ3 324 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 NEK1Q96PY6 1258 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 TCEAL9Q9UHQ7 104 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 GINS2Q9Y248 185 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
SFXN3-207ENST00000489434 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 SMCO2A6NFE2 343 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 STXBP3O00186 592 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 TBX10O75333 385 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 ITGB1P05556 798 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
SFXN3-207ENST00000489434 KLRC1P26715 233 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 IRS1P35568 1242 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 SREBF1P36956 1147 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
SFXN3-207ENST00000489434 FGD1P98174 961 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 DLX2Q07687 328 aaPredicted RBP13.57□□□□□ -0.24
SFXN3-207ENST00000489434 ITGB3BPQ13352 177 aaPredicted RBP13.57□□□□□ -0.24
SFXN3-207ENST00000489434 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 MCTP2Q6DN12 878 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 DHX32Q7L7V1 743 aaKnown RBP13.57□□□□□ -0.24
SFXN3-207ENST00000489434 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 CRIPAKQ8N1N5 446 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 SPPL3Q8TCT6 385 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 ATP8B4Q8TF62 1192 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 KCNH6Q9H252 994 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 C1orf112Q9NSG2 853 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 COL1A2P08123 1366 aa13.57□□□□□ -0.24
SFXN3-207ENST00000489434 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
SFXN3-207ENST00000489434 EVPLQ92817 2033 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
SFXN3-207ENST00000489434 GPR182O15218 404 aa13.56□□□□□ -0.24
SFXN3-207ENST00000489434 ATG7O95352 703 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms