RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 CYP2W1Q8TAV3 490 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 NEK9Q8TD19 979 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 LPAR1Q92633 364 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 RIT2Q99578 217 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 TMEM39BQ9GZU3 492 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 ARFGAP3Q9NP61 516 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
CSMD2-209ENST00000489419 TBC1D7Q9P0N9 293 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 PIM2Q9P1W9 311 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 RGS17Q9UGC6 210 aaPredicted RBP9.73□□□□□ -0.85
CSMD2-209ENST00000489419 FHOD1Q9Y613 1164 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 SAR1BQ9Y6B6 198 aa9.73□□□□□ -0.85
CSMD2-209ENST00000489419 RBAK-RBAKDNI3L0D1 243 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 EML1O00423 815 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SLC16A3O15427 465 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 COQ9O75208 318 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SLITRK3O94933 977 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ICAM1P05362 532 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PRLRP16471 622 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 POLD1P28340 1107 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 EIF4A3P38919 411 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 HSD17B4P51659 736 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PRELPP51888 382 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 KIF11P52732 1056 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 TNFAIP1Q13829 316 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 TNIP1Q15025 636 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 EPHA7Q15375 998 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ASTE1Q2TB18 679 aaPredicted RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 CIAPIN1Q6FI81 312 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 RINT1Q6NUQ1 792 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 CC2D1AQ6P1N0 951 aaPredicted RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SFR1Q86XK3 245 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 NELFCDQ8IXH7 590 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PRPF38AQ8NAV1 312 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 NACC1Q96RE7 527 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 WDR18Q9BV38 432 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 FGFBP2Q9BYJ0 223 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 BHMT2Q9H2M3 363 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 LUC7LQ9NQ29 371 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PCDHA13Q9Y5I0 950 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 UBE4BO95155 1302 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 COL4A5P29400 1685 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 LRRC53A6NM62 1247 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 WNT10BO00744 389 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 EPHB6O15197 1021 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 WDR46O15213 610 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 AKR1B10O60218 316 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 GAS7O60861 476 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 TACC1O75410 805 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SERPING1P05155 500 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 PNMA6AP0CW24 399 aaPredicted RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 NR2F2P24468 414 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 CKAP4Q07065 602 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SETDB1Q15047 1291 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SLC9C1Q4G0N8 1177 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 SFMBT2Q5VUG0 894 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 B3GNT9Q6UX72 402 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 STXBP4Q6ZWJ1 553 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 C1orf186Q6ZWK4 172 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 MCF2L2Q86YR7 1114 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 EXOC8Q8IYI6 725 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 MSL3Q8N5Y2 521 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 LACRTQ9GZZ8 138 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ZHX3Q9H4I2 956 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 AIPL1Q9NZN9 384 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ARMCX3Q9UH62 379 aaPredicted RBP9.72□□□□□ -0.85
CSMD2-209ENST00000489419 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
CSMD2-209ENST00000489419 ATAD5Q96QE3 1844 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 RCCD1A6NED2 376 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 PHF20L1A8MW92 1017 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 ZNF263O14978 683 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 NOL4O94818 638 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 FDX1P10109 184 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 TBC1D5Q92609 795 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 GBP3Q9H0R5 595 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 MYOZ2Q9NPC6 264 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 TRIM10Q9UDY6 481 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 PUF60Q9UHX1 559 aaKnown RBP9.71□□□□□ -0.85
CSMD2-209ENST00000489419 FBXL5Q9UKA1 691 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.85
CSMD2-209ENST00000489419 ERLIN1O75477 346 aa9.71□□□□□ -0.86
CSMD2-209ENST00000489419 MCM3P25205 808 aa9.71□□□□□ -0.86
CSMD2-209ENST00000489419 HOXD13P35453 343 aa9.71□□□□□ -0.86
CSMD2-209ENST00000489419 MAGEA1P43355 309 aa9.71□□□□□ -0.86
CSMD2-209ENST00000489419 ZNF131P52739 623 aa9.71□□□□□ -0.86
CSMD2-209ENST00000489419 CACNB1Q02641 598 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms