RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TAF2Q6P1X5 1199 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 MAML2Q8IZL2 1156 aaPredicted RBP17.58■□□□□ 0.4
UFD1-209ENST00000489406 FEZF2Q8TBJ5 459 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.4
UFD1-209ENST00000489406 TMEM47Q9BQJ4 181 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.58■□□□□ 0.4
UFD1-209ENST00000489406 SIT1Q9Y3P8 196 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 NRCAMQ92823 1304 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 SPTLC1O15269 473 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
UFD1-209ENST00000489406 PDHBP11177 359 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
UFD1-209ENST00000489406 TGM1P22735 817 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 PLCB3Q01970 1234 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
UFD1-209ENST00000489406 MCF2L2Q86YR7 1114 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 MAF1Q9H063 256 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 CPVLQ9H3G5 476 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
UFD1-209ENST00000489406 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 ABCB11O95342 1321 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 ANP32CO43423 234 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
UFD1-209ENST00000489406 CTDSPL2Q05D32 466 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 FAM102BQ5T8I3 360 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 OTOP3Q7RTS5 596 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 NAPBQ9H115 298 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 PARD6AQ9NPB6 346 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 ZNF215Q9UL58 517 aaPredicted RBP17.56■□□□□ 0.4
UFD1-209ENST00000489406 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
UFD1-209ENST00000489406 CEP295Q9C0D2 2601 aa17.56■□□□□ 0.4
UFD1-209ENST00000489406 SOBPA7XYQ1 873 aa17.55■□□□□ 0.4
UFD1-209ENST00000489406 TGFB3P10600 412 aa17.55■□□□□ 0.4
UFD1-209ENST00000489406 MRPS6P82932 125 aaKnown RBP17.55■□□□□ 0.4
UFD1-209ENST00000489406 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
UFD1-209ENST00000489406 RSAD2Q8WXG1 361 aa17.55■□□□□ 0.4
UFD1-209ENST00000489406 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
UFD1-209ENST00000489406 CWH43Q9H720 699 aa17.55■□□□□ 0.4
UFD1-209ENST00000489406 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 SLC30A4O14863 429 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
UFD1-209ENST00000489406 CFBP00751 764 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 GLULP15104 373 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 LAG3P18627 525 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 CA8P35219 290 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
UFD1-209ENST00000489406 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
UFD1-209ENST00000489406 TMC5Q6UXY8 1006 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 CCDC149Q6ZUS6 474 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 ATRIPQ8WXE1 791 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 GPR20Q99678 358 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 UBA5Q9GZZ9 404 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 IGSF9Q9P2J2 1179 aa17.54■□□□□ 0.4
UFD1-209ENST00000489406 ZZEF1O43149 2961 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 FNDC1Q4ZHG4 1894 aaPredicted RBP17.53■□□□□ 0.4
UFD1-209ENST00000489406 LRRN2O75325 713 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 PROS1P07225 676 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 PAK2Q13177 524 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
UFD1-209ENST00000489406 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 VSIG10LQ86VR7 867 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 IL31RAQ8NI17 732 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 TMX1Q9H3N1 280 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.53■□□□□ 0.4
UFD1-209ENST00000489406 SPEGQ15772 3267 aa17.53■□□□□ 0.4
UFD1-209ENST00000489406 KAT6AQ92794 2004 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.52■□□□□ 0.4
UFD1-209ENST00000489406 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
UFD1-209ENST00000489406 PBX3P40426 434 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 KRT17Q04695 432 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 ZNF528Q3MIS6 628 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 PHLDB3Q6NSJ2 640 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 CYFIP1Q7L576 1253 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 KBTBD3Q8NAB2 608 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 NETO1Q8TDF5 533 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 FAM49AQ9H0Q0 323 aaPredicted RBP17.52■□□□□ 0.4
UFD1-209ENST00000489406 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
UFD1-209ENST00000489406 SQORQ9Y6N5 450 aa17.52■□□□□ 0.4
UFD1-209ENST00000489406 FLNBO75369 2602 aaKnown RBP17.52■□□□□ 0.4
UFD1-209ENST00000489406 DENND4AQ7Z401 1863 aa17.52■□□□□ 0.39
UFD1-209ENST00000489406 EPCAMP16422 314 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 PDE4AP27815 886 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 PMLP29590 882 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 PGM5Q15124 567 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 IER5Q5VY09 327 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 KCNT2Q6UVM3 1135 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 GPR152Q8TDT2 470 aa17.51■□□□□ 0.39
UFD1-209ENST00000489406 ZBTB10Q96DT7 871 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms