RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 SGMS1Q86VZ5 419 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 NPAS4Q8IUM7 802 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 CMTR2Q8IYT2 770 aaKnown RBP10.69□□□□□ -0.7
SNX17-207ENST00000489402 P2RX5Q93086 422 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 PGBD1Q96JS3 809 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 PCYT2Q99447 389 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 IGFLR1Q9H665 355 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 AGO3Q9H9G7 860 aaKnown RBP10.69□□□□□ -0.7
SNX17-207ENST00000489402 RIC8AQ9NPQ8 531 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 LRFN2Q9ULH4 789 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 PCDHA2Q9Y5H9 948 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 KIAA1671Q9BY89 1806 aa10.69□□□□□ -0.7
SNX17-207ENST00000489402 CNTNAP5Q8WYK1 1306 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 SMIM35A0A1B0GVV1 85 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 hCG_1984214I3L0E3 225 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 SCG2P13521 617 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 GTF2F1P35269 517 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNX17-207ENST00000489402 ZNF76P36508 570 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 LTBRP36941 435 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 SLC26A2P50443 739 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 ADCY7P51828 1080 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 TMEM62Q0P6H9 643 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 SMAD4Q13485 552 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 PLCB4Q15147 1175 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 NECTIN1Q15223 517 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 SMAD2Q15796 467 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 CLUL1Q15846 466 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 CTC1Q2NKJ3 1217 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 PAN2Q504Q3 1202 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 NAALADL2Q58DX5 795 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 WWC2Q6AWC2 1192 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 PLPPR4Q7Z2D5 763 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 RTN4RL1Q86UN2 441 aaPredicted RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 NME8Q8N427 588 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 ZNF713Q8N859 430 aaPredicted RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 LINC01599Q8WXQ3 324 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 ANO3Q9BYT9 981 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 ALG13Q9NP73 1137 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 PADI3Q9ULW8 664 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 PLAGL2Q9UPG8 496 aa10.68□□□□□ -0.7
SNX17-207ENST00000489402 MRPL42Q9Y6G3 142 aaKnown RBP10.68□□□□□ -0.7
SNX17-207ENST00000489402 KDM3AQ9Y4C1 1321 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 BACH1O14867 736 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 MBTPS2O43462 519 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 ARP10275 920 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 NDUFV1P49821 464 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 KRT76Q01546 638 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 AP3B2Q13367 1082 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 RTN1Q16799 776 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 ODR4Q5SWX8 454 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 MTHFD1LQ6UB35 978 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 AGO4Q9HCK5 861 aaKnown RBP10.67□□□□□ -0.7
SNX17-207ENST00000489402 CD207Q9UJ71 328 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 MYO7AQ13402 2215 aa10.67□□□□□ -0.7
SNX17-207ENST00000489402 COL1A2P08123 1366 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 SMCO2A6NFE2 343 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
SNX17-207ENST00000489402 ZBTB43O43298 467 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 HBP1O60381 514 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 TBX10O75333 385 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 ATG7O95352 703 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 ITGB1P05556 798 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 IBSPP21815 317 aaPredicted RBP10.66□□□□□ -0.7
SNX17-207ENST00000489402 IRS1P35568 1242 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 SREBF1P36956 1147 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 GATMP50440 423 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
SNX17-207ENST00000489402 FUT2Q10981 343 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
SNX17-207ENST00000489402 KLHL23Q8NBE8 558 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 TMEM260Q9NX78 707 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 TCEAL9Q9UHQ7 104 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 GINS2Q9Y248 185 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 PCDHB7Q9Y5E2 793 aa10.66□□□□□ -0.7
SNX17-207ENST00000489402 DENND3A2RUS2 1198 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 STXBP3O00186 592 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 MEIS1O00470 390 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 LINC01565O15544 149 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 RPS6KA5O75582 802 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 CPA1P15085 419 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 DNAJB1P25685 340 aa10.65□□□□□ -0.7
SNX17-207ENST00000489402 KLRC1P26715 233 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms