RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 BHMT2Q9H2M3 363 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 KCTD10Q9H3F6 313 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 METTL14Q9HCE5 456 aaKnown RBP11.98□□□□□ -0.49
ITSN1-231ENST00000489261 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
ITSN1-231ENST00000489261 TTC26A0AVF1 554 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CA12O43570 354 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CCND2P30279 289 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 LBX1P52954 281 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 KRT76Q01546 638 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CYP4A11Q02928 519 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 GOLGA8FQ08AF8 430 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 GOLGA8DPQ0D2H9 430 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ADAM9Q13443 819 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 MTMR1Q13613 665 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ALCAMQ13740 583 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 PGM5Q15124 567 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 LRRC41Q15345 812 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 MEA1Q16626 185 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CCDC40Q4G0X9 1142 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 VSIG10LQ86VR7 867 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 NSUN6Q8TEA1 469 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 PCMTD1Q96MG8 357 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 REEP2Q9BRK0 252 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 TEX13BQ9BXU2 312 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ZHX3Q9H4I2 956 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 PXMP2Q9NR77 195 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
ITSN1-231ENST00000489261 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 MYO1AQ9UBC5 1043 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
ITSN1-231ENST00000489261 NPHP3-ACAD11A0A0J9YXS1 232 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ARHGEF35A5YM69 484 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 CXCL11O14625 94 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 IREB2P48200 963 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ZNF131P52739 623 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 HMGCS2P54868 508 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 UBXN2AP68543 259 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 KRT83P78385 493 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 MRPS9P82933 396 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 MYBPC2Q14324 1141 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ZNF746Q6NUN9 644 aaPredicted RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 TRIM65Q6PJ69 517 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ARMC9Q7Z3E5 817 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 SFR1Q86XK3 245 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 C4orf19Q8IY42 314 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 GOLGA5Q8TBA6 731 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 IWS1Q96ST2 819 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 MAP7D2Q96T17 732 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 TTYH3Q9C0H2 523 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ACAD9Q9H845 621 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 MRPL44Q9H9J2 332 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 PARVGQ9HBI0 331 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 ANKEF1Q9NU02 776 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 CGNQ9P2M7 1197 aaKnown RBP11.96□□□□□ -0.49
ITSN1-231ENST00000489261 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 CSADQ9Y600 493 aa11.96□□□□□ -0.49
ITSN1-231ENST00000489261 SOWAHDA6NJG2 315 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 CHMP2AO43633 222 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 RAD9BQ6WBX8 426 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 SYT10Q6XYQ8 523 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 TOGARAM2Q6ZUX3 1019 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 TXLNBQ8N3L3 684 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 MYCT1Q8N699 235 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 SYN2Q92777 582 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-231ENST00000489261 RUSC1Q9BVN2 902 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
ITSN1-231ENST00000489261 TBC1D7Q9P0N9 293 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms