RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PDE12Q6L8Q7 609 aaKnown RBP7.51□□□□□ -1.21
PDCD4-209ENST00000489049 FAM117BQ6P1L5 589 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 SHC4Q6S5L8 630 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.51□□□□□ -1.21
PDCD4-209ENST00000489049 PLA2G4DQ86XP0 818 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 IQUBQ8NA54 791 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 CNNM3Q8NE01 707 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
PDCD4-209ENST00000489049 FAM46AQ96IP4 442 aaKnown RBP7.51□□□□□ -1.21
PDCD4-209ENST00000489049 AK8Q96MA6 479 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 PSMD1Q99460 953 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 TRIM5Q9C035 493 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 FTOQ9C0B1 505 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDCD4-209ENST00000489049 ZMYND12Q9H0C1 365 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 CUEDC2Q9H467 287 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 MAGEF1Q9HAY2 307 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 CABP5Q9NP86 173 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 MTMR4Q9NYA4 1195 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 IMPACTQ9P2X3 320 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 PI4KBQ9UBF8 816 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 MAD2L2Q9UI95 211 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 KCNJ14Q9UNX9 436 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 ANKRD31Q8N7Z5 1873 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 NAV1Q8NEY1 1877 aa7.51□□□□□ -1.21
PDCD4-209ENST00000489049 IGKV6D-41A0A0C4DH26 115 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 KIAA1324LA8MWY0 1029 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 DTNBO60941 627 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 ADAM11O75078 769 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 TGFB1P01137 390 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 SNHG28P0DPA3 235 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 PTPRAP18433 802 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 MARCKSP29966 332 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 CRKP46108 304 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 PLCD1P51178 756 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 DUOXA2Q1HG44 320 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 DACT2Q5SW24 774 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 APOBEC3HQ6NTF7 200 aaKnown RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 CDC42EP5Q6NZY7 148 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 METTL16Q86W50 562 aaKnown RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 NCAPG2Q86XI2 1143 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 STK11IPQ8N1F8 1099 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 TTLL6Q8N841 843 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 SPATA20Q8TB22 786 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 MKL1Q969V6 931 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 DYNLL2Q96FJ2 89 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 GSDMAQ96QA5 445 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 ADAM19Q9H013 955 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 OSBPL5Q9H0X9 879 aaPredicted RBP7.5□□□□□ -1.21
PDCD4-209ENST00000489049 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 RIOX1Q9H6W3 641 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 KANSL2Q9H9L4 492 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 ELP3Q9H9T3 547 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 GJB4Q9NTQ9 266 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 RMND1Q9NWS8 449 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 NYAP2Q9P242 653 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 STX8Q9UNK0 236 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 MYH6P13533 1939 aa7.5□□□□□ -1.21
PDCD4-209ENST00000489049 ATRNL1Q5VV63 1379 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 NMT2O60551 498 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 COBLO75128 1261 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 OFD1O75665 1012 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 MED26O95402 600 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 TUBB4AP04350 444 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 PPP1R2P41236 205 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 POSTNQ15063 836 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 NPY5RQ15761 445 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 CCDC93Q567U6 631 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 PHLDB3Q6NSJ2 640 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 LUZP1Q86V48 1076 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 CERS5Q8N5B7 392 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 DCAF4Q8WV16 495 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 SMARCE1Q969G3 411 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 POP1Q99575 1024 aaKnown RBP7.49□□□□□ -1.21
PDCD4-209ENST00000489049 RAB34Q9BZG1 259 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 TMOD2Q9NZR1 351 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 SAP30BPQ9UHR5 308 aaKnown RBP7.49□□□□□ -1.21
PDCD4-209ENST00000489049 HERC5Q9UII4 1024 aaKnown RBP7.49□□□□□ -1.21
PDCD4-209ENST00000489049 HDAC9Q9UKV0 1011 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 JAG2Q9Y219 1238 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
PDCD4-209ENST00000489049 DDX60LQ5H9U9 1706 aaKnown RBP7.49□□□□□ -1.21
PDCD4-209ENST00000489049 TNS1Q9HBL0 1735 aaKnown RBP7.49□□□□□ -1.21
PDCD4-209ENST00000489049 FOCADQ5VW36 1801 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 PNMA6FA0A0J9YX94 578 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 STXBP3O00186 592 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 DDX3YO15523 660 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 ECE2O60344 883 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 GCFC2P16383 781 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 SARSP49591 514 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 MRPL12P52815 198 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 TGFB2P61812 414 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 MYL5Q02045 173 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 NFIAQ12857 509 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 NONOQ15233 471 aaKnown RBP eCLIP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms