RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 FAM84BQ96KN1 310 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 DHRS1Q96LJ7 313 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 DBNDD2Q9BQY9 259 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 DUSP23Q9BVJ7 150 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 ACTR10Q9NZ32 417 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 BRCA2P51587 3418 aa9.75□□□□□ -0.85
TRAPPC12-221ENST00000489032 CEP290O15078 2479 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 A0A1B0GUL7 405 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 FAM86C2PA6NEL3 165 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 TNFRSF10CO14798 259 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 SASH1O94885 1247 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 PROCP04070 461 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 IL1R1P14778 569 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 TIMM10P62072 90 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 IRX6P78412 446 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 STRIP1Q5VSL9 837 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 TTLL5Q6EMB2 1281 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 CDH24Q86UP0 819 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 SIRT2Q8IXJ6 389 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 C19orf47Q8N9M1 422 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 BAHD1Q8TBE0 780 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 PSMG3-AS1Q96PY0 264 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 OSBPL1AQ9BXW6 950 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 ASTN2O75129 1339 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 MYO3BQ8WXR4 1341 aa9.74□□□□□ -0.85
TRAPPC12-221ENST00000489032 VIL1P09327 827 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 FSTP19883 344 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 CCDC158Q5M9N0 1113 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 TTC6Q86TZ1 520 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 AGBL3Q8NEM8 1001 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 TDRD7Q8NHU6 1098 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 SLC9A7Q96T83 725 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 RWDD1Q9H446 243 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 FPGT-TNNI3KV9GXZ4 949 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
TRAPPC12-221ENST00000489032 WDR64B1ANS9 1081 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 CLEC3AO75596 197 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 SLITRK5O94991 958 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 IFIT2P09913 472 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 UQCRFS1P1P0C7P4 283 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 NF2P35240 595 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 MMP14P50281 582 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 INHBEP58166 350 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 CHAF1AQ13111 956 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 TTC39AQ5SRH9 613 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 UNC5AQ6ZN44 842 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 AACSQ86V21 672 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 FAM169BQ8N8A8 192 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 DPF3Q92784 378 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 LRRCC1Q9C099 1032 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 DCTPP1Q9H773 170 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 DENND2AQ9ULE3 1009 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 ZNF609O15014 1411 aa9.72□□□□□ -0.85
TRAPPC12-221ENST00000489032 LEFTY1O75610 366 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 ADORA1P30542 326 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 ADMP35318 185 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 FKBP1AP62942 108 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 RSPO4Q2I0M5 234 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 DACT2Q5SW24 774 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 WDR66Q8TBY9 1149 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 CD99L2Q8TCZ2 262 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 IL1RAPL2Q9NP60 686 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 FAM205AQ6ZU69 1335 aa9.71□□□□□ -0.86
TRAPPC12-221ENST00000489032 A0A1W2PQH9 124 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 MANSC4A6NHS7 340 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 FAM170BA6NMN3 283 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 PHKA1P46020 1223 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 RBL2Q08999 1139 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 FXNQ16595 210 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 BBS9Q3SYG4 887 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 SLC9C1Q4G0N8 1177 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 MFSD14BQ5SR56 506 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 SHKBP1Q8TBC3 707 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 HNRNPLLQ8WVV9 542 aaKnown RBP9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 COX4I2Q96KJ9 171 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 SLC6A18Q96N87 628 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 CCDC8Q9H0W5 538 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 JAG2Q9Y219 1238 aa9.7□□□□□ -0.86
TRAPPC12-221ENST00000489032 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms