RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 IGDCC4Q8TDY8 1250 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 TRAPPC12Q8WVT3 735 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 EDAQ92838 391 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
USP11-210ENST00000489030 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
USP11-210ENST00000489030 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 TUBE1Q9UJT0 475 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 FAM50BQ9Y247 325 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 KIAA1671Q9BY89 1806 aa13.13□□□□□ -0.31
USP11-210ENST00000489030 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 NCK2O43639 380 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 EYA4O95677 639 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
USP11-210ENST00000489030 LIFRP42702 1097 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 NRIP1P48552 1158 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 NDUFV1P49821 464 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 TCF15Q12870 199 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 UBE2SQ16763 222 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 TAF2Q6P1X5 1199 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 TSHZ1Q6ZSZ6 1077 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 SENP7Q9BQF6 1050 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 KAT6AQ92794 2004 aa13.12□□□□□ -0.31
USP11-210ENST00000489030 TMEM221A6NGB7 291 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 LOC730098B7Z3J9 87 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 M0R296 226 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
USP11-210ENST00000489030 PER2O15055 1255 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 MGEA5O60502 916 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 STAM2O75886 525 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 INSRRP14616 1297 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
USP11-210ENST00000489030 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 SRBD1Q8N5C6 995 aaKnown RBP13.11□□□□□ -0.31
USP11-210ENST00000489030 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 POF1BQ8WVV4 589 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 AGXT2Q9BYV1 514 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
USP11-210ENST00000489030 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
USP11-210ENST00000489030 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 RXRAP19793 462 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 MCM2P49736 904 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 VCPP55072 806 aaKnown RBP13.1□□□□□ -0.31
USP11-210ENST00000489030 ZXDAP98168 799 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 CMTR2Q8IYT2 770 aaKnown RBP13.1□□□□□ -0.31
USP11-210ENST00000489030 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 GLG1Q92896 1179 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 LY9Q9HBG7 655 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 CDH22Q9UJ99 828 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
USP11-210ENST00000489030 AK2P54819 239 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 COASYQ13057 564 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
USP11-210ENST00000489030 CBX2Q14781 532 aaPredicted RBP13.09□□□□□ -0.31
USP11-210ENST00000489030 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 NLRX1Q86UT6 975 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 ZNF654Q8IZM8 581 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 BRF1Q92994 677 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 P2RX5Q93086 422 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 GPRASP2Q96D09 838 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 POP1Q99575 1024 aaKnown RBP13.09□□□□□ -0.31
USP11-210ENST00000489030 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 ERAP1Q9NZ08 941 aa13.09□□□□□ -0.31
USP11-210ENST00000489030 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.32
USP11-210ENST00000489030 CALM1P0DP23 149 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 CALM2P0DP24 149 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 CALM3P0DP25 149 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 SCG2P13521 617 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 ERVFC1P60507 584 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 PLCB4Q15147 1175 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 XRRA1Q6P2D8 792 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 BMP8AQ7Z5Y6 402 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 RSPH3Q86UC2 560 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
USP11-210ENST00000489030 ASIC4Q96FT7 647 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
USP11-210ENST00000489030 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.32
USP11-210ENST00000489030 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms