RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ZFYP08048 801 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ALADP13716 330 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ZNF211Q13398 564 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 DNAAF2Q9NVR5 837 aaKnown RBP17.57■□□□□ 0.4
MCF2L-229ENST00000488765 GALNT8Q9NY28 637 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 TBK1Q9UHD2 729 aa17.57■□□□□ 0.4
MCF2L-229ENST00000488765 ASAP2O43150 1006 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 CCNFP41002 786 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 VSIG1Q86XK7 387 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 ARL10Q8N8L6 244 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 MAIP1Q8WWC4 291 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 KIFAP3Q92845 792 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 RNF25Q96BH1 459 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-229ENST00000488765 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-229ENST00000488765 TLR2O60603 784 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 CLSTN1O94985 981 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 PHKA1P46020 1223 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-229ENST00000488765 MAGEB6Q8N7X4 407 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-229ENST00000488765 EP400Q96L91 3159 aa17.56■□□□□ 0.4
MCF2L-229ENST00000488765 UTRNP46939 3433 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 PEX5P50542 639 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ATP2C1P98194 919 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ITIH4Q14624 930 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 LONRF1Q17RB8 773 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 FAM98CQ17RN3 349 aaKnown RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 VWA3BQ502W6 1294 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 DNAJC9Q8WXX5 260 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 PBKQ96KB5 322 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 KLRC4O43908 158 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 MYL1P05976 194 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 SPATA31D3P0C874 917 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ADD2P35612 726 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 BNIP1Q12981 228 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 CUL1Q13616 776 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 SPATA31D4Q6ZUB0 917 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 TMEM60Q9H2L4 133 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 UTP11Q9Y3A2 253 aaKnown RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 SRRM3A6NNA2 597 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 FUT4P22083 530 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 EPHB2P29323 1055 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 GBP1P32455 592 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 CCDC6Q16204 474 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 DENND2CQ68D51 928 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ANKS1AQ92625 1134 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 NDNQ99608 321 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ZMYND12Q9H0C1 365 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 CNOT10Q9H9A5 744 aaKnown RBP17.55■□□□□ 0.4
MCF2L-229ENST00000488765 ARHGEF3Q9NR81 526 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 TBC1D7Q9P0N9 293 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 CTNNAL1Q9UBT7 734 aa17.55■□□□□ 0.4
MCF2L-229ENST00000488765 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 SUN1O94901 812 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 LIFRP42702 1097 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 GALNT17Q6IS24 598 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 AADACL2Q6P093 401 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 FBXO25Q8TCJ0 367 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 SDR42E1Q8WUS8 393 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 IFT74Q96LB3 600 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 NIP7Q9Y221 180 aaKnown RBP eCLIP17.54■□□□□ 0.4
MCF2L-229ENST00000488765 MYH7P12883 1935 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 FGGP02679 453 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-229ENST00000488765 PDE6AP16499 860 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 GSTT1P30711 240 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 GNAQP50148 359 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 KCNMA1Q12791 1236 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 HGSNATQ68CP4 663 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 SNRNP27Q8WVK2 155 aaKnown RBP17.54■□□□□ 0.4
MCF2L-229ENST00000488765 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 SIK3Q9Y2K2 1263 aa17.54■□□□□ 0.4
MCF2L-229ENST00000488765 CETN3O15182 167 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 ZSCAN9O15535 394 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-229ENST00000488765 COQ9O75208 318 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 MRPS35P82673 323 aaKnown RBP17.53■□□□□ 0.4
MCF2L-229ENST00000488765 MGAT5Q09328 741 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 PLS1Q14651 629 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 SLC9C1Q4G0N8 1177 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 TCERG1LQ5VWI1 586 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 PTF1AQ7RTS3 328 aa17.53■□□□□ 0.4
MCF2L-229ENST00000488765 TLCD1Q96CP7 247 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms