RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MMGT1Q8N4V1 131 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 NOX5Q96PH1 765 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 QTRT2Q9H974 415 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 EPB41L5Q9HCM4 733 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 VGLL3A8MV65 326 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 TISP43B9A030 160 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ZNF76P36508 570 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 NOP2P46087 812 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 AARSP49588 968 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 C8orf74Q6P047 294 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ZNF572Q7Z3I7 529 aaPredicted RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 AFAP1L1Q8TED9 768 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 AENQ8WTP8 325 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 DCAF4Q8WV16 495 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 PRMT6Q96LA8 375 aaPredicted RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 GANQ9H2C0 597 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 VIPAS39Q9H9C1 493 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ECE2O60344 883 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 PRLRP16471 622 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ZC3H3Q8IXZ2 948 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 EDEM3Q9BZQ6 932 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 WRAP73Q9P2S5 460 aaPredicted RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 GRID2IPA4D2P6 1211 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 SERPING1P05155 500 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 COPB2P35606 906 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 ASIC2Q16515 512 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 ABCB5Q2M3G0 1257 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 DPY19L2P1Q6NXN4 242 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 MIGA2Q7L4E1 593 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 FBXO11Q86XK2 927 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 MED4Q9NPJ6 270 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 PI4KBQ9UBF8 816 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 KCNK3O14649 394 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 HEXIM1O94992 359 aaKnown RBP13.91□□□□□ -0.18
CLIC4-202ENST00000488683 MCM3P25205 808 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 HSPA1LP34931 641 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 NAA35Q5VZE5 725 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 GOLGA5Q8TBA6 731 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 SPAG5Q96R06 1193 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 WDR18Q9BV38 432 aa13.91□□□□□ -0.18
CLIC4-202ENST00000488683 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
CLIC4-202ENST00000488683 CETN3O15182 167 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 GFPT2O94808 682 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 TRIM49P0CI25 452 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 TRIM49CP0CI26 452 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 TCP1P17987 556 aaKnown RBP13.9□□□□□ -0.18
CLIC4-202ENST00000488683 PON1P27169 355 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 TTMPQ5BVD1 217 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 MUM1L1Q5H9M0 696 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 STIM2Q9P246 746 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 ASTN1O14525 1302 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 TMEM150BA6NC51 233 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 UCHL3P15374 230 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 PAFAH1B1P43034 410 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 SLC18A3Q16572 532 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 SLFN12Q8IYM2 578 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 OR2W6PQ8NHA6 318 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
CLIC4-202ENST00000488683 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
CLIC4-202ENST00000488683 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 FAM184BQ9ULE4 1060 aa13.9□□□□□ -0.18
CLIC4-202ENST00000488683 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 GNA14O95837 355 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 RPA1P27694 616 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 HOXA7P31268 230 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 CYP2J2P51589 502 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ITIH3Q06033 890 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 SYT2Q8N9I0 419 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ZSWIM2Q8NEG5 633 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 SYN2Q92777 582 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 CSRNP1Q96S65 589 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ACBD3Q9H3P7 528 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 ARMCX3Q9UH62 379 aaPredicted RBP13.89□□□□□ -0.19
CLIC4-202ENST00000488683 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 GOLGA6CA6NDK9 693 aa13.89□□□□□ -0.19
CLIC4-202ENST00000488683 MYO1CO00159 1063 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms