RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 A0A0D9SFI3 127 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 HSF2BPO75031 334 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 KCNC4Q03721 635 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 PAK2Q13177 524 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 NR1I3Q14994 352 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 RASA2Q15283 850 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 LONP2Q86WA8 852 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 PDCD7Q8N8D1 485 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 ZNF280CQ8ND82 737 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 NOC3LQ8WTT2 800 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 PTCD2Q8WV60 388 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 ABCF3Q9NUQ8 709 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 SQORQ9Y6N5 450 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 BHMG1C9JSJ3 638 aaPredicted RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 GNAT2P19087 354 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 HOXC9P31274 260 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 SKIV2L2P42285 1042 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 GUCY2DQ02846 1103 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 VASH1Q7L8A9 365 aaPredicted RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 TRPM8Q7Z2W7 1104 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 ZBED8Q8IZ13 594 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 CCDC42Q96M95 316 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 NEUROD6Q96NK8 337 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 SEC62Q99442 399 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 AS3MTQ9HBK9 375 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 ZNF304Q9HCX3 659 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 GDF3Q9NR23 364 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 TYW1Q9NV66 732 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 PTTG2Q9NZH5 202 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 CTTNBP2NLQ9P2B4 639 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 SAP30BPQ9UHR5 308 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 REXO2Q9Y3B8 237 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 FBP2O00757 339 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 PARNO95453 639 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 SLC16A2P36021 539 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 ARFIP2P53365 341 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 KIF22Q14807 665 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 PARP6Q2NL67 630 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 KLHL35Q6PF15 583 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 LRIG3Q6UXM1 1119 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 CPSF7Q8N684 471 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 LILRB1Q8NHL6 650 aaPredicted RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 DPF3Q92784 378 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 RSPH9Q9H1X1 276 aaPredicted RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 LGR6Q9HBX8 967 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 C6orf203Q9P0P8 240 aaPredicted RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 HERC5Q9UII4 1024 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 FAM47E-STBD1D6RA91 191 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 CDK2AP1O14519 115 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 SLC26A4O43511 780 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 GLULP15104 373 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 PLCG2P16885 1265 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 CDK7P50613 346 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 MYL5Q02045 173 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 CACNA2D4Q7Z3S7 1137 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 CCDC197Q8NCU1 140 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 EURLQ9NYK6 297 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 DLG5Q8TDM6 1919 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 KAT6BQ8WYB5 2073 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 TBCAO75347 108 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 ZBED1O96006 694 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 ATP1A1P05023 1023 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 TUBA4AP68366 448 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 EZH2Q15910 746 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 PTPN21Q16825 1174 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 KAZNQ674X7 775 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 SIGIRRQ6IA17 410 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 SNRNP48Q6IEG0 339 aaKnown RBP6.88□□□□□ -1.31
SIK3-212ENST00000488337 IQCEQ6IPM2 695 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 TMEM151BQ8IW70 566 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 DCLK2Q8N568 766 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 RETREG2Q8NC44 543 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 RIN3Q8TB24 985 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 DRC3Q9H069 523 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 RAB17Q9H0T7 212 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 TRPC7Q9HCX4 862 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 NMRK1Q9NWW6 199 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 USP6P35125 1406 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 BCL9LQ86UU0 1499 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 LAMA4Q16363 1823 aa6.88□□□□□ -1.31
SIK3-212ENST00000488337 PHF20L1A8MW92 1017 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 MATN2O00339 956 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 PLSCR1O15162 318 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 SERPINC1P01008 464 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 VAV1P15498 845 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 PCK1P35558 622 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 RTP1P59025 263 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 DIXDC1Q155Q3 683 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 MYLK3Q32MK0 819 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 HAUS3Q68CZ6 603 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 KRT28Q7Z3Y7 464 aa6.87□□□□□ -1.31
SIK3-212ENST00000488337 KRT27Q7Z3Y8 459 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms