RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 LRRC45Q96CN5 670 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 TRIM31Q9BZY9 425 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 DPH5Q9H2P9 285 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 YY1AP1Q9H869 796 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 CNOT8Q9UFF9 292 aaKnown RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 DDX60LQ5H9U9 1706 aaKnown RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 AFPP02771 609 aaKnown RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 PLCG2P16885 1265 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 HOXA7P31268 230 aaPredicted RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 HOXD13P35453 343 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 DAAM2Q86T65 1068 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 SLC12A6Q9UHW9 1150 aa17.88■□□□□ 0.45
GCOM1-210ENST00000488175 NOVA2Q9UNW9 492 aaKnown RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
GCOM1-210ENST00000488175 GMNCA6NCL1 334 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 BTNL10A8MVZ5 291 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 F8W031 263 aaPredicted RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 AKAP3O75969 853 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 ZBTB48P10074 688 aaPredicted RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 CASP4P49662 377 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 SLC12A3P55017 1021 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 EDRF1Q3B7T1 1238 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 YTHDF3Q7Z739 585 aaKnown RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 DHX36Q9H2U1 1008 aaKnown RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 CES2O00748 559 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 XRCC5P13010 732 aaKnown RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 USP8P40818 1118 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 C10orf76Q5T2E6 689 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 SFR1Q86XK3 245 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
GCOM1-210ENST00000488175 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
GCOM1-210ENST00000488175 FLOT1O75955 427 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 TTLL1O95922 423 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 ACTN3Q08043 901 aaPredicted RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 IFI16Q16666 785 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 SPRED3Q2MJR0 410 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 ADAT2Q7Z6V5 191 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 CATSPER3Q86XQ3 398 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 ZC3H3Q8IXZ2 948 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 CD248Q9HCU0 757 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 NAV1Q8NEY1 1877 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 MPHOSPH10O00566 681 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 ZBTB5O15062 677 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 CLIC2O15247 247 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 MAGOHP61326 146 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 DHX9Q08211 1270 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 KCNA1Q09470 495 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 GIT2Q14161 759 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 KNOP1Q1ED39 458 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 C6orf89Q6UWU4 347 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 MAGOHBQ96A72 148 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 JPH2Q9BR39 696 aaPredicted RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 IKZF4Q9H2S9 585 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 BZW2Q9Y6E2 419 aaKnown RBP17.86■□□□□ 0.45
GCOM1-210ENST00000488175 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
GCOM1-210ENST00000488175 RSPH10B2B2RC85 870 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 DDX3XO00571 662 aaKnown RBP eCLIP17.85■□□□□ 0.451e-13■■■■■ 33.4
GCOM1-210ENST00000488175 H2AFZP0C0S5 128 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 RSPH10BP0C881 870 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 GCFC2P16383 781 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 H2AFVQ71UI9 128 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 FRMD5Q7Z6J6 570 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 CALR3Q96L12 384 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 NCAPGQ9BPX3 1015 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 REEP2Q9BRK0 252 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 OSGEPQ9NPF4 335 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 LOC102724159A0A0B4J2E5 919 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 FRMD3A2A2Y4 597 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 TRAPPC3O43617 180 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 GFPT2O94808 682 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 COPB2P35606 906 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 PWP2Q15269 919 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 EPHA7Q15375 998 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 PPP1R18Q6NYC8 613 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 RUFY4Q6ZNE9 571 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 TRIM51Q9BSJ1 452 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 DDX4Q9NQI0 724 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 DAGLAQ9Y4D2 1042 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 PCDHB13Q9Y5F0 798 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 ATP2C2O75185 946 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 GABPAQ06546 454 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 KRT71Q3SY84 523 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 CCDC121Q6ZUS5 278 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 TMC3Q7Z5M5 1100 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 NT5DC3Q86UY8 548 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 EIF1ADQ8N9N8 165 aaKnown RBP17.85■□□□□ 0.45
GCOM1-210ENST00000488175 KCNMB3Q9NPA1 279 aa17.85■□□□□ 0.45
GCOM1-210ENST00000488175 SIX2Q9NPC8 291 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms