RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TIPINQ9BVW5 301 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 KATNAL1Q9BW62 490 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 DBR1Q9UK59 544 aaKnown RBP12.33□□□□□ -0.44
HDLBP-242ENST00000488013 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
HDLBP-242ENST00000488013 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CABYRO75952 493 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 SLC34A2O95436 690 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
HDLBP-242ENST00000488013 LBX1P52954 281 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CAP1Q01518 475 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CYP4A11Q02928 519 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
HDLBP-242ENST00000488013 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
HDLBP-242ENST00000488013 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 RNF180Q86T96 592 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-242ENST00000488013 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 PNMA5Q96PV4 448 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
HDLBP-242ENST00000488013 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
HDLBP-242ENST00000488013 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-242ENST00000488013 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
HDLBP-242ENST00000488013 HBP1O60381 514 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 OATP04181 439 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 MMP3P08254 477 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 PLA2G4BP0C869 781 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 CST5P28325 142 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-242ENST00000488013 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 CNNM4Q6P4Q7 775 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-242ENST00000488013 BANK1Q8NDB2 785 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 COPS5Q92905 334 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 PAGE5Q96GU1 130 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
HDLBP-242ENST00000488013 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
HDLBP-242ENST00000488013 H3BRB1 525 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 LGALS2P05162 132 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 C6orf222P0C671 652 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 RFC5P40937 340 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 PRKCEQ02156 737 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 POSTNQ15063 836 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 CCDC60Q8IWA6 550 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
HDLBP-242ENST00000488013 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 PLXNB2O15031 1838 aa12.3□□□□□ -0.44
HDLBP-242ENST00000488013 A0A087X0B3 334 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 RRN3P2A6NIE6 340 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 DGAT1O75907 488 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 F2P00734 622 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 KRT18P05783 430 aaKnown RBP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 GNAT1P11488 350 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 SCP2P22307 547 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 CCND3P30281 292 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 RARRES1P49788 294 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 SLC12A3P55017 1021 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 UTP14CQ5TAP6 766 aaKnown RBP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 CAVIN1Q6NZI2 390 aaKnown RBP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 SLC17A8Q8NDX2 589 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 SLC7A3Q8WY07 619 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 GSDMAQ96QA5 445 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 PLIN2Q99541 437 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDLBP-242ENST00000488013 BCAS3Q9H6U6 928 aa12.29□□□□□ -0.44
HDLBP-242ENST00000488013 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms