RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SMARCC2Q8TAQ2 1214 aa6.84□□□□□ -1.31
BRCA1-217ENST00000487825 TIMM13Q9Y5L4 95 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-217ENST00000487825 TNS2Q63HR2 1409 aa6.84□□□□□ -1.32
BRCA1-217ENST00000487825 PIK3C2AO00443 1686 aa6.84□□□□□ -1.32
BRCA1-217ENST00000487825 GRIA2P42262 883 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 TXNRD1Q16881 649 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 SLC10A6Q3KNW5 377 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 E4F1Q66K89 784 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 PTF1AQ7RTS3 328 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 DCP2Q8IU60 420 aaKnown RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 PPIL6Q8IXY8 311 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 SP8Q8IXZ3 490 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 SLC43A3Q8NBI5 491 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 TMEM145Q8NBT3 493 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 ZNF526Q8TF50 670 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 TRMT2BQ96GJ1 504 aaKnown RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 NOX5Q96PH1 765 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 AP5M1Q9H0R1 490 aa6.83□□□□□ -1.32
BRCA1-217ENST00000487825 THRAP3Q9Y2W1 955 aaKnown RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 CICQ96RK0 1608 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-217ENST00000487825 SGSM2O43147 1006 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 CPP00450 1065 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 SCG5P05408 212 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 LCP1P13796 627 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 GFRA1P56159 465 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 CACNB2Q08289 660 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-217ENST00000487825 CHRNA2Q15822 529 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 VWA3BQ502W6 1294 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 DENND5AQ6IQ26 1287 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 RCBTB1Q8NDN9 531 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 RELTQ969Z4 430 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 DDX11Q96FC9 970 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 CHAMP1Q96JM3 812 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 CCDC140Q96MF4 163 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 GMLQ99445 158 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 LUC7LQ9NQ29 371 aaKnown RBP6.82□□□□□ -1.32
BRCA1-217ENST00000487825 FBXL7Q9UJT9 491 aa6.82□□□□□ -1.32
BRCA1-217ENST00000487825 RPGRIP1LQ68CZ1 1315 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 COL5A2P05997 1499 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-217ENST00000487825 E9PSI1 815 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 AGRPO00253 132 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 MYO1BO43795 1136 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 LTBRP36941 435 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 SLURP1P55000 103 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 HTRA3P83110 453 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 KCNAB2Q13303 367 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 NFIXQ14938 502 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 DDR2Q16832 855 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 SAPCD2Q86UD0 394 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 NLRP10Q86W26 655 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 CPA5Q8WXQ8 436 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 TMEM169Q96HH4 297 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 SYT3Q9BQG1 590 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 PODXL2Q9NZ53 605 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 PCDHA2Q9Y5H9 948 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 YTHDC2Q9H6S0 1430 aaKnown RBP6.81□□□□□ -1.32
BRCA1-217ENST00000487825 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 ROCK1Q13464 1354 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 GPRASP1Q5JY77 1395 aa6.81□□□□□ -1.32
BRCA1-217ENST00000487825 TRPM1Q7Z4N2 1603 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 RGPD5Q99666 1765 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 B8ZZF3 427 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 KLF4O43474 513 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 TOMM70O94826 608 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 KCNC1P48547 511 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 CRB1P82279 1406 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
BRCA1-217ENST00000487825 CAP1Q01518 475 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 ACBD5Q5T8D3 534 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-217ENST00000487825 MROH9Q5TGP6 573 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 LIPIQ6XZB0 460 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 MILR1Q7Z6M3 343 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 PMFBP1Q8TBY8 1022 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 ZBTB8AQ96BR9 441 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 EPN3Q9H201 632 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 ADAM7Q9H2U9 754 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
BRCA1-217ENST00000487825 PRRG2O14669 202 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 FOXD2O60548 495 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-217ENST00000487825 C8BP07358 591 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 POLD1P28340 1107 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 GTF2A2P52657 109 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 EVA1CP58658 441 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
BRCA1-217ENST00000487825 ETV3LQ6ZN32 361 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 SEC14L1Q92503 715 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 C1orf159Q96HA4 380 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 IER2Q9BTL4 223 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 STK26Q9P289 416 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 X6R8D5 127 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 COL18A1P39060 1754 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 CPDO75976 1380 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 LY75O60449 1722 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
BRCA1-217ENST00000487825 PIK3C2GO75747 1445 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms