RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 SCLYQ96I15 445 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 GPR20Q99678 358 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 LRFN3Q9BTN0 628 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 TEKT3Q9BXF9 490 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
TOP3B-216ENST00000487485 ZDHHC9Q9Y397 364 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 PCDHA11Q9Y5I1 949 aa12.05□□□□□ -0.48
TOP3B-216ENST00000487485 GSTTP1A0A1W2PQM5 241 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 ZBBXA8MT70 800 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 B4GALT4O60513 344 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 KPNA6O60684 536 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 PSMD10O75832 226 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 CABYRO75952 493 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 CCNE2O96020 404 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 DDIT3P35638 169 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 TXKP42681 527 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 ACTR2P61160 394 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 PSMC6P62333 389 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 PURAQ00577 322 aaKnown RBP12.04□□□□□ -0.48
TOP3B-216ENST00000487485 KRT76Q01546 638 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 PTGDRQ13258 359 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 AAK1Q2M2I8 961 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 ZNF746Q6NUN9 644 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-216ENST00000487485 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
TOP3B-216ENST00000487485 C4orf32Q8N8J7 132 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 CERS4Q9HA82 394 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 MYH9P35579 1960 aaKnown RBP12.04□□□□□ -0.48
TOP3B-216ENST00000487485 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
TOP3B-216ENST00000487485 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 ATG7O95352 703 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 OR52Z1P0C646 297 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 TCF7P36402 384 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 NUCB2P80303 420 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 UNC45AQ9H3U1 944 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 TTC12Q9H892 705 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-216ENST00000487485 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
TOP3B-216ENST00000487485 TCHHQ07283 1943 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 LAD1O00515 517 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 CHMP2AO43633 222 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 TLL1O43897 1013 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 LGALS2P05162 132 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 CA3P07451 260 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 CYP2C9P11712 490 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-216ENST00000487485 SFNP31947 248 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 ATP2C1P98194 919 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-216ENST00000487485 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.49
TOP3B-216ENST00000487485 PPP2R5CQ13362 524 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 MIS18BP1Q6P0N0 1132 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 B3GNT9Q6UX72 402 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 ABHD15Q6UXT9 468 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 MIER3Q7Z3K6 550 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-216ENST00000487485 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 SCN5AQ14524 2016 aa12.02□□□□□ -0.49
TOP3B-216ENST00000487485 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 H3BRB1 525 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 BMP15O95972 392 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 PSAPP07602 524 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 SUPT20HL2P0C7V6 817 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 PRPHP41219 470 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 TECP42680 631 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 JAK3P52333 1124 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 SPIRE1Q08AE8 756 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 SWSAP1Q6NVH7 229 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 DTHD1Q6ZMT9 781 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 KAT2BQ92831 832 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 GLG1Q92896 1179 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOP3B-216ENST00000487485 USP28Q96RU2 1077 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 PCYT2Q99447 389 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOP3B-216ENST00000487485 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
TOP3B-216ENST00000487485 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
TOP3B-216ENST00000487485 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms