RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 C11orf16Q9NQ32 467 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 STARD7Q9NQZ5 370 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 PDLIM7Q9NR12 457 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 ZSWIM5Q9P217 1185 aa7.54□□□□□ -1.2
SOX2-OT-210ENST00000487240 TRIM43BA6NCK2 446 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 SNHG28P0DPA3 235 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 MAPK8P45983 427 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 PTH1RQ03431 593 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 DSC3Q14574 896 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 SNX17Q15036 470 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 PDE12Q6L8Q7 609 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 FOXR1Q6PIV2 292 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 RNF207Q6ZRF8 634 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 CYB5R4Q7L1T6 521 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 ZNF438Q7Z4V0 828 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 KLHDC9Q8NEP7 349 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 RUFY2Q8WXA3 655 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 CLEC4DQ8WXI8 215 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 BADQ92934 168 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 TRIM43Q96BQ3 446 aaPredicted RBP7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 KRT23Q9C075 422 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 KATNBL1Q9H079 304 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 NDFIP2Q9NV92 336 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 MARK1Q9P0L2 795 aa7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 ATXN7L1Q9ULK2 861 aaPredicted RBP7.53□□□□□ -1.2
SOX2-OT-210ENST00000487240 RAD50Q92878 1312 aa7.52□□□□□ -1.2
SOX2-OT-210ENST00000487240 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.2
SOX2-OT-210ENST00000487240 LCTP09848 1927 aa7.52□□□□□ -1.2
SOX2-OT-210ENST00000487240 DYNC1LI2O43237 492 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 NEFLP07196 543 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 ASGR1P07306 291 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 CYP21A2P08686 494 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 CLTBP09497 229 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 RBM25P49756 843 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 ALDH5A1P51649 535 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 GJA9P57773 515 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 TRDNQ13061 729 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 CDC37Q16543 378 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 ASPRV1Q53RT3 343 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 IFIT1BQ5T764 474 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 CCSAPQ6IQ19 270 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 XKR5Q6UX68 686 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 TLK2Q86UE8 772 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 ADGRF4Q8IZF3 695 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 PCSK9Q8NBP7 692 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 NUP133Q8WUM0 1156 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 GLT1D1Q96MS3 346 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 AP5M1Q9H0R1 490 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 UPF3AQ9H1J1 476 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 TMEM39AQ9NV64 488 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 ADD3Q9UEY8 706 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 LTBP2Q14767 1821 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 WDR19Q8NEZ3 1342 aa7.52□□□□□ -1.21
SOX2-OT-210ENST00000487240 RBM47A0AV96 593 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 DCDC2CA8MYV0 355 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 IFIT3O14879 490 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 CTAGE5O15320 804 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 SGSM2O43147 1006 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 RAG1P15918 1043 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 ITGB8P26012 769 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 CST5P28325 142 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 NT5C2P49902 561 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 RPS6P62753 249 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 CCINQ13939 588 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 SHHQ15465 462 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 FSCN1Q16658 493 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 QRICH1Q2TAL8 776 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 LRIT3Q3SXY7 679 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 C9orf50Q5SZB4 431 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 TAPT1Q6NXT6 567 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 CXCL17Q6UXB2 119 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 Q7L0L9 218 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 CHST3Q7LGC8 479 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 TBC1D5Q92609 795 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 ANKS1AQ92625 1134 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 VTA1Q9NP79 307 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 PNMA2Q9UL42 364 aa7.51□□□□□ -1.21
SOX2-OT-210ENST00000487240 A0A0U1RQG5 324 aaPredicted RBP7.5□□□□□ -1.21
SOX2-OT-210ENST00000487240 ERICH2A1L162 156 aa7.5□□□□□ -1.21
SOX2-OT-210ENST00000487240 KLRF2D3W0D1 207 aa7.5□□□□□ -1.21
SOX2-OT-210ENST00000487240 E7EWF7 191 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms