RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 INSRRP14616 1297 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 PRPHP41219 470 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 TXKP42681 527 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 ADAM17P78536 824 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 ZNF174Q15697 407 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 LRRC8DQ7L1W4 858 aa16.44■□□□□ 0.22
LIMS3-205ENST00000487150 JPH2Q9BR39 696 aaPredicted RBP16.44■□□□□ 0.22
LIMS3-205ENST00000487150 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 M0QZ92 97 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 SPIRE1Q08AE8 756 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
LIMS3-205ENST00000487150 GJA10Q969M2 543 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 ZSWIM4Q9H7M6 989 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 DNAH12Q6ZR08 3092 aa16.43■□□□□ 0.22
LIMS3-205ENST00000487150 TNRC18O15417 2968 aaPredicted RBP16.43■□□□□ 0.22
LIMS3-205ENST00000487150 TREHO43280 583 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 CKBP12277 381 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 TMOD1P28289 359 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 CYP2C18P33260 490 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 THPOP40225 353 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIMS3-205ENST00000487150 IGBP1P78318 339 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
LIMS3-205ENST00000487150 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
LIMS3-205ENST00000487150 CTAGE1Q96RT6 745 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 LXNQ9BS40 222 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 IL23AQ9NPF7 189 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.42■□□□□ 0.22
LIMS3-205ENST00000487150 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 PCDHA2Q9Y5H9 948 aa16.42■□□□□ 0.22
LIMS3-205ENST00000487150 SMIM35A0A1B0GVV1 85 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 WNT7AO00755 349 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 ACTN1P12814 892 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 CSF2RAP15509 400 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 MUTP22033 750 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 ITGB8P26012 769 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 TOB1P50616 345 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-205ENST00000487150 ATP2C1P98194 919 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-205ENST00000487150 PTGDRQ13258 359 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 IER5Q5VY09 327 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 NME8Q8N427 588 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 PPP1R13LQ8WUF5 828 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
LIMS3-205ENST00000487150 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 WNT8AQ9H1J5 351 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 PRO3102Q9H379 93 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 SEPT9Q9UHD8 586 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-205ENST00000487150 MTMR6Q9Y217 621 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 PCDHB6Q9Y5E3 794 aa16.41■□□□□ 0.22
LIMS3-205ENST00000487150 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 EML1O00423 815 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
LIMS3-205ENST00000487150 ZNF862O60290 1169 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 EFCAB14O75071 495 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 LYPLA2O95372 231 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 CCL23P55773 120 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 ZNF200P98182 395 aaPredicted RBP16.4■□□□□ 0.22
LIMS3-205ENST00000487150 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 PDIA5Q14554 519 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 UGCGQ16739 394 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
LIMS3-205ENST00000487150 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 BANK1Q8NDB2 785 aa16.4■□□□□ 0.22
LIMS3-205ENST00000487150 EIF2AK1Q9BQI3 630 aaKnown RBP16.4■□□□□ 0.22
LIMS3-205ENST00000487150 NIFKQ9BYG3 293 aaKnown RBP16.4■□□□□ 0.22
LIMS3-205ENST00000487150 ATP4AP20648 1035 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 KLRC1P26715 233 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 RFC5P40937 340 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 TECP42680 631 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 DNM2P50570 870 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 CDC42EP1Q00587 391 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 RESTQ13127 1097 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 MARCH8Q5T0T0 291 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 USP38Q8NB14 1042 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 AK8Q96MA6 479 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 COLQQ9Y215 455 aaPredicted RBP16.39■□□□□ 0.21
LIMS3-205ENST00000487150 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
LIMS3-205ENST00000487150 POTEMA6NI47 508 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 SLC26A4O43511 780 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 C22orf31O95567 290 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.21
LIMS3-205ENST00000487150 YWHABP31946 246 aaKnown RBP16.38■□□□□ 0.21
LIMS3-205ENST00000487150 CYP4A11Q02928 519 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 HIC1Q14526 733 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 NBR1Q14596 966 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 FAM26DQ5JW98 314 aa16.38■□□□□ 0.21
LIMS3-205ENST00000487150 ODR4Q5SWX8 454 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms