RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CLSTN1O94985 981 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 FAM153BP0C7A2 387 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 PFKPQ01813 784 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 DUSP8Q13202 625 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 HSP90AA2PQ14568 343 aaPredicted RBP5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 ZC3H12BQ5HYM0 836 aaKnown RBP5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 ZNF227Q86WZ6 799 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 IFNL2Q8IZJ0 200 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 ZBTB38Q8NAP3 1195 aaPredicted RBP5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 TMEM145Q8NBT3 493 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 ZSWIM2Q8NEG5 633 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 C1orf159Q96HA4 380 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 DPYSL5Q9BPU6 564 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 MMRN2Q9H8L6 949 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 TELO2Q9Y4R8 837 aa5.16□□□□□ -1.58
SNRNP27-204ENST00000487029 MSCO60682 206 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 KCNJ6P48051 423 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 GFRA1P56159 465 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 RAC3P60763 192 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 PPP2R2AP63151 447 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 USP10Q14694 798 aaKnown RBP5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 PLEKHG4Q58EX7 1191 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 REXO1L1PQ8IX06 675 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 AARSD1Q9BTE6 412 aaKnown RBP5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 SLC6A20Q9NP91 592 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 ARHGEF4Q9NR80 690 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 ARHGAP20Q9P2F6 1191 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 OAZ3Q9UMX2 235 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 SLC30A1Q9Y6M5 507 aa5.15□□□□□ -1.59
SNRNP27-204ENST00000487029 TRAV20A0A0B4J274 112 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 CPP00450 1065 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 FAHP16930 419 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 CR2P20023 1033 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 PAN2Q504Q3 1202 aaKnown RBP5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 CD276Q5ZPR3 534 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 C16orf86Q6ZW13 317 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 TRIM48Q8IWZ4 208 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 ZNF808Q8N4W9 903 aaPredicted RBP5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 ZG16BQ96DA0 208 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 OR14A2Q96R54 314 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 TACO1Q9BSH4 297 aaKnown RBP5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 NPFFR2Q9Y5X5 522 aa5.14□□□□□ -1.59
SNRNP27-204ENST00000487029 CCDC163A0A0D9SF12 145 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 H0Y858 1186 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 KRIT1O00522 736 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 CAPNS1P04632 268 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 ENO2P09104 434 aaPredicted RBP5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 ACRV1P26436 265 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 TUSC3Q13454 348 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 SLC35F1Q5T1Q4 408 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 CYP4F22Q6NT55 531 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 ZNF662Q6ZS27 426 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 POLNQ7Z5Q5 900 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 KIAA0907Q7Z7F0 614 aaPredicted RBP5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 SYNPOQ8N3V7 929 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 IPO9Q96P70 1041 aaKnown RBP5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 CDC6Q99741 560 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 PLA2G12BQ9BX93 195 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 CARD11Q9BXL7 1154 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 WDR26Q9H7D7 661 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 DMRT1Q9Y5R6 373 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 SBNO2Q9Y2G9 1366 aa5.13□□□□□ -1.59
SNRNP27-204ENST00000487029 ANKRD62A6NC57 917 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 ZNF839A8K0R7 811 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 MAFKO60675 156 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 CDC14BO60729 498 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 FGFR1P11362 822 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 COL6A2P12110 1019 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 KRT4P19013 534 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 GRIA2P42262 883 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 TUBA3CQ13748 450 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 TCEA2Q15560 299 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 TBR1Q16650 682 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 TUBA3EQ6PEY2 450 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 Q6ZPA2 131 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 SCUBE1Q8IWY4 988 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 EXOC2Q96KP1 924 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 CRAMP1Q96RY5 1269 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 FEZ1Q99689 392 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 DHRS4Q9BTZ2 278 aa5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 SLKQ9H2G2 1235 aaPredicted RBP5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 HECAQ9UBI9 543 aaPredicted RBP5.12□□□□□ -1.59
SNRNP27-204ENST00000487029 TRBV23-1A0A0A0MS06 115 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 ACOT7O00154 380 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 PRODHO43272 600 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 ASMTLO95671 621 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 PABPC1P11940 636 aaKnown RBP5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 NCLP19338 710 aaKnown RBP5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 RRADP55042 308 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 COL10A1Q03692 680 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 FOXL1Q12952 345 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 TOP3AQ13472 1001 aaPredicted RBP5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 TAF7LQ5H9L4 462 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 FAM209AQ5JX71 171 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 NSMFQ6X4W1 530 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 CCDC140Q96MF4 163 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms