RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PDIA3P30101 505 aaKnown RBP27.92■■■□□ 2.06
LIME1-206ENST00000487026 IER5Q5VY09 327 aa27.92■■■□□ 2.06
LIME1-206ENST00000487026 TSHZ1Q6ZSZ6 1077 aa27.92■■■□□ 2.06
LIME1-206ENST00000487026 TMEM192Q8IY95 271 aa27.92■■■□□ 2.06
LIME1-206ENST00000487026 CCDC12Q8WUD4 166 aaPredicted RBP27.92■■■□□ 2.06
LIME1-206ENST00000487026 IPO5O00410 1097 aaKnown RBP27.91■■■□□ 2.06
LIME1-206ENST00000487026 CCDC60Q8IWA6 550 aaPredicted RBP27.91■■■□□ 2.06
LIME1-206ENST00000487026 IL17RAQ96F46 866 aa27.91■■■□□ 2.06
LIME1-206ENST00000487026 ZNF577Q9BSK1 485 aa27.91■■■□□ 2.06
LIME1-206ENST00000487026 BDP1A6H8Y1 2624 aa27.91■■■□□ 2.06
LIME1-206ENST00000487026 GNA11P29992 359 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 GPM6BQ13491 265 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 SWSAP1Q6NVH7 229 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 MTHFD1LQ6UB35 978 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 LARP6Q9BRS8 491 aaKnown RBP27.9■■■□□ 2.06
LIME1-206ENST00000487026 ZNF302Q9NR11 478 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 VPS54Q9P1Q0 977 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 TRPV2Q9Y5S1 764 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 NCOR1O75376 2440 aa27.9■■■□□ 2.06
LIME1-206ENST00000487026 KLRC1P26715 233 aa27.89■■■□□ 2.06
LIME1-206ENST00000487026 TOB2Q14106 344 aaPredicted RBP27.89■■■□□ 2.06
LIME1-206ENST00000487026 FAM160B1Q5W0V3 765 aa27.89■■■□□ 2.06
LIME1-206ENST00000487026 RUFY3Q7L099 469 aa27.89■■■□□ 2.06
LIME1-206ENST00000487026 RTN4RL1Q86UN2 441 aaPredicted RBP27.89■■■□□ 2.06
LIME1-206ENST00000487026 FIBCD1Q8N539 461 aa27.89■■■□□ 2.06
LIME1-206ENST00000487026 SAMD11Q96NU1 681 aa27.89■■■□□ 2.06
LIME1-206ENST00000487026 RNF26Q9BY78 433 aaPredicted RBP27.89■■■□□ 2.06
LIME1-206ENST00000487026 H3BNC9 293 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 IFNAR1P17181 557 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 SLC26A2P50443 739 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 EVCP57679 992 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 PRR16Q569H4 304 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 MCTP2Q6DN12 878 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 MIS18BP1Q6P0N0 1132 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 PDXDC2PQ6P474 469 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 TRMT1LQ7Z2T5 733 aaKnown RBP27.88■■■□□ 2.05
LIME1-206ENST00000487026 ATP8B4Q8TF62 1192 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 LINC01599Q8WXQ3 324 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 CELF4Q9BZC1 486 aaKnown RBP27.88■■■□□ 2.05
LIME1-206ENST00000487026 ZSWIM6Q9HCJ5 1215 aa27.88■■■□□ 2.05
LIME1-206ENST00000487026 SMIM35A0A1B0GVV1 85 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 M0QZ92 97 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 HBP1O60381 514 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 RPLP2P05387 115 aaKnown RBP27.87■■■□□ 2.05
LIME1-206ENST00000487026 ATP4AP20648 1035 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 MRPL38Q96DV4 380 aaKnown RBP27.87■■■□□ 2.05
LIME1-206ENST00000487026 TBC1D22BQ9NU19 505 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 PADI3Q9ULW8 664 aa27.87■■■□□ 2.05
LIME1-206ENST00000487026 BICD2Q8TD16 824 aa27.86■■■□□ 2.05
LIME1-206ENST00000487026 BRWD1Q9NSI6 2320 aa27.86■■■□□ 2.05
LIME1-206ENST00000487026 EDIL3O43854 480 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 SETQ01105 290 aaPredicted RBP27.85■■■□□ 2.05
LIME1-206ENST00000487026 KRT76Q01546 638 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 PTPROQ16827 1216 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 TMEM266Q2M3C6 531 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 CKAP2LQ8IYA6 745 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 NME8Q8N427 588 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 CCDC148Q8NFR7 591 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 UBE2ZQ9H832 354 aaPredicted RBP27.85■■■□□ 2.05
LIME1-206ENST00000487026 CDHR5Q9HBB8 845 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 GINS2Q9Y248 185 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 CYP46A1Q9Y6A2 500 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 SQORQ9Y6N5 450 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 IGSF9BQ9UPX0 1349 aa27.85■■■□□ 2.05
LIME1-206ENST00000487026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.84■■■□□ 2.05
LIME1-206ENST00000487026 ZBTB42B2RXF5 422 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 CIITAP33076 1130 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 CTNNB1P35222 781 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 PAK2Q13177 524 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 ZNF746Q6NUN9 644 aaPredicted RBP27.84■■■□□ 2.05
LIME1-206ENST00000487026 KIAA0319LQ8IZA0 1049 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 LENG9Q96B70 501 aa27.84■■■□□ 2.05
LIME1-206ENST00000487026 UPF3BQ9BZI7 483 aaKnown RBP27.84■■■□□ 2.05
LIME1-206ENST00000487026 RC3H2Q9HBD1 1191 aaKnown RBP27.84■■■□□ 2.05
LIME1-206ENST00000487026 LOXHD1Q8IVV2 1947 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 LINC00271P0C7V0 271 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 NLRP5P59047 1200 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 BTG3Q14201 252 aaPredicted RBP27.83■■■□□ 2.05
LIME1-206ENST00000487026 ZNF484Q5JVG2 852 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 ZNF689Q96CS4 500 aaPredicted RBP27.83■■■□□ 2.05
LIME1-206ENST00000487026 MAFBQ9Y5Q3 323 aaPredicted RBP27.83■■■□□ 2.05
LIME1-206ENST00000487026 TTC3P53804 2025 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 ADGRA3Q8IWK6 1321 aa27.83■■■□□ 2.05
LIME1-206ENST00000487026 NLRC5Q86WI3 1866 aa27.83■■■□□ 2.04
LIME1-206ENST00000487026 COL4A6Q14031 1691 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 DGKIO75912 1065 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 IBSPP21815 317 aaPredicted RBP27.82■■■□□ 2.04
LIME1-206ENST00000487026 BMPR1AP36894 532 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 SSRP1Q08945 709 aaKnown RBP27.82■■■□□ 2.04
LIME1-206ENST00000487026 STK3Q13188 491 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 BANK1Q8NDB2 785 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 PPP1R16BQ96T49 567 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 FTHL17Q9BXU8 183 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 TMX1Q9H3N1 280 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 GABBR1Q9UBS5 961 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 TCEAL9Q9UHQ7 104 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 PCDHA10Q9Y5I2 948 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 KDM3AQ9Y4C1 1321 aa27.82■■■□□ 2.04
LIME1-206ENST00000487026 EPB41L2O43491 1005 aaKnown RBP27.81■■■□□ 2.04
LIME1-206ENST00000487026 PSAPP07602 524 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms