RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 CHRNA1P02708 482 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 USP11P51784 963 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 MRPS6P82932 125 aaKnown RBP22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 MGAT3Q09327 533 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 PDXDC2PQ6P474 469 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 NECAB1Q8N987 351 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 LENG9Q96B70 501 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 GJB4Q9NTQ9 266 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 THEGQ9P2T0 379 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 KCNJ14Q9UNX9 436 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 PCDHA2Q9Y5H9 948 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
TNFRSF18-204ENST00000486728 M0R2N6 131 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 GHRP10912 638 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 XBP1P17861 261 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 NEK4P51957 841 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 ME3Q16798 604 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 FAM117BQ6P1L5 589 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 TSHZ1Q6ZSZ6 1077 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 FAM43BQ6ZT52 329 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 BLIDQ8IZY5 108 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 NME8Q8N427 588 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 TBCKQ8TEA7 893 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 ATP8B4Q8TF62 1192 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 TRAPPC12Q8WVT3 735 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 ATXN2LQ8WWM7 1075 aaKnown RBP22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 TOP1MTQ969P6 601 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 CDY2AQ9Y6F7 541 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 CHD9Q3L8U1 2897 aa22.28■■□□□ 1.16
TNFRSF18-204ENST00000486728 SMIM35A0A1B0GVV1 85 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 LCHNA4D1U4 455 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 PSAPP07602 524 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 ERVK-21P61565 698 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 HTRA4P83105 476 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 CCDC85BQ15834 202 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 CKAP2LQ8IYA6 745 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 MICALL1Q8N3F8 863 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 DAGLBQ8NCG7 672 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 SAMD11Q96NU1 681 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 YME1L1Q96TA2 773 aa22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 COL25A1Q9BXS0 654 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 FAM49AQ9H0Q0 323 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF18-204ENST00000486728 LINC01553A4QN01 128 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 ARHGEF15O94989 841 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 TJAP1Q5JTD0 557 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 ZNF484Q5JVG2 852 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 FBXO47Q5MNV8 452 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 SWSAP1Q6NVH7 229 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 CCDC60Q8IWA6 550 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 GJA10Q969M2 543 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 FTHL17Q9BXU8 183 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 LMCD1Q9NZU5 365 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 CEP131Q9UPN4 1083 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 PCDHA10Q9Y5I2 948 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 TRPV2Q9Y5S1 764 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 MTCH2Q9Y6C9 303 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 STK36Q9NRP7 1315 aa22.26■■□□□ 1.15
TNFRSF18-204ENST00000486728 WDR64B1ANS9 1081 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 MSH4O15457 936 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 LPIN1Q14693 890 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 C8orf34Q49A92 452 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 SP7Q8TDD2 431 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 BBXQ8WY36 941 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 FAM167AQ96KS9 214 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 RIT2Q99578 217 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 PHF20Q9BVI0 1012 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 SAMM50Q9Y512 469 aa22.25■■□□□ 1.15
TNFRSF18-204ENST00000486728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 EPOPA6NHQ4 379 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 RFXAPO00287 272 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 FDPSP14324 419 aaKnown RBP22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 ATP4AP20648 1035 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 GRB10Q13322 594 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 IL27Q8NEV9 243 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 MAFBQ9Y5Q3 323 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 A0A0C4DFX4 3053 aa22.24■■□□□ 1.15
TNFRSF18-204ENST00000486728 COL4A6Q14031 1691 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 GAS7O60861 476 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 UPP2O95045 317 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 TDP2O95551 362 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 SFNP31947 248 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 JAK3P52333 1124 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 MRPS5P82675 430 aaKnown RBP22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 SKIV2LQ15477 1246 aaKnown RBP22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 AAK1Q2M2I8 961 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 ODR4Q5SWX8 454 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 MOXD1Q6UVY6 613 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 KRT25Q7Z3Z0 450 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 WASF1Q92558 559 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 GTF3C6Q969F1 213 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 TEKT3Q9BXF9 490 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 ORC3Q9UBD5 711 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 KDM3AQ9Y4C1 1321 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 CHD7Q9P2D1 2997 aa22.23■■□□□ 1.15
TNFRSF18-204ENST00000486728 KLRC1P26715 233 aa22.22■■□□□ 1.15
TNFRSF18-204ENST00000486728 NONOQ15233 471 aaKnown RBP eCLIP22.22■■□□□ 1.15
TNFRSF18-204ENST00000486728 INF2Q27J81 1249 aa22.22■■□□□ 1.15
TNFRSF18-204ENST00000486728 Q4G0T1 1027 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms