RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 DDX39AO00148 427 aaKnown RBP25.5■■□□□ 1.67
SREBF1-214ENST00000486311 ADAMTS3O15072 1205 aa25.5■■□□□ 1.67
SREBF1-214ENST00000486311 REC8O95072 547 aa25.5■■□□□ 1.67
SREBF1-214ENST00000486311 COL9A1P20849 921 aa25.5■■□□□ 1.67
SREBF1-214ENST00000486311 PSMA5P28066 241 aa25.5■■□□□ 1.67
SREBF1-214ENST00000486311 GPM6BQ13491 265 aa25.5■■□□□ 1.67
SREBF1-214ENST00000486311 REXO1Q8N1G1 1221 aaKnown RBP25.5■■□□□ 1.67
SREBF1-214ENST00000486311 UBE2ZQ9H832 354 aaPredicted RBP25.5■■□□□ 1.67
SREBF1-214ENST00000486311 RC3H2Q9HBD1 1191 aaKnown RBP25.5■■□□□ 1.67
SREBF1-214ENST00000486311 SIP14410 1827 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.49■■□□□ 1.67
SREBF1-214ENST00000486311 SMIM35A0A1B0GVV1 85 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 GNA11P29992 359 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 CD52P31358 61 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 NTRK3Q16288 839 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 FAM160B1Q5W0V3 765 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 MTHFD1LQ6UB35 978 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 NME8Q8N427 588 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 FIBCD1Q8N539 461 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 PHKBQ93100 1093 aa25.49■■□□□ 1.67
SREBF1-214ENST00000486311 M0QZ92 97 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 IPO5O00410 1097 aaKnown RBP25.48■■□□□ 1.67
SREBF1-214ENST00000486311 BACH1O14867 736 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 HBP1O60381 514 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 EVCP57679 992 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 SETQ01105 290 aaPredicted RBP25.48■■□□□ 1.67
SREBF1-214ENST00000486311 TMEM62Q0P6H9 643 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 TIGD5Q53EQ6 642 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 MIS18BP1Q6P0N0 1132 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 CCDC60Q8IWA6 550 aaPredicted RBP25.48■■□□□ 1.67
SREBF1-214ENST00000486311 ATP8B4Q8TF62 1192 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 LINC01599Q8WXQ3 324 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 FTHL17Q9BXU8 183 aa25.48■■□□□ 1.67
SREBF1-214ENST00000486311 CELF4Q9BZC1 486 aaKnown RBP25.48■■□□□ 1.67
SREBF1-214ENST00000486311 ADGRA3Q8IWK6 1321 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 IGSF9BQ9UPX0 1349 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 KDM3AQ9Y4C1 1321 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 LINC00271P0C7V0 271 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 AKAP17AQ02040 695 aaKnown RBP25.47■■□□□ 1.67
SREBF1-214ENST00000486311 ZNF689Q96CS4 500 aaPredicted RBP25.47■■□□□ 1.67
SREBF1-214ENST00000486311 ZNF577Q9BSK1 485 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 RNF26Q9BY78 433 aaPredicted RBP25.47■■□□□ 1.67
SREBF1-214ENST00000486311 ZNF302Q9NR11 478 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 TBC1D22BQ9NU19 505 aa25.47■■□□□ 1.67
SREBF1-214ENST00000486311 C5orf67F2Z3F1 127 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 EPB41L2O43491 1005 aaKnown RBP25.46■■□□□ 1.67
SREBF1-214ENST00000486311 RB1P06400 928 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 IFNAR1P17181 557 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 PDXDC2PQ6P474 469 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 RTN4RL1Q86UN2 441 aaPredicted RBP25.46■■□□□ 1.67
SREBF1-214ENST00000486311 BICD2Q8TD16 824 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 PADI3Q9ULW8 664 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 RWDD3Q9Y3V2 267 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 KAT6AQ92794 2004 aa25.46■■□□□ 1.67
SREBF1-214ENST00000486311 COL1A2P08123 1366 aa25.45■■□□□ 1.67
SREBF1-214ENST00000486311 DGKIO75912 1065 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 KLRC1P26715 233 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 PDIA3P30101 505 aaKnown RBP25.45■■□□□ 1.66
SREBF1-214ENST00000486311 CIITAP33076 1130 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 CTNNB1P35222 781 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 BMPR1AP36894 532 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 KRT76Q01546 638 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 LEXMQ3ZCV2 418 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 ZNF484Q5JVG2 852 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 ZNF746Q6NUN9 644 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-214ENST00000486311 SWSAP1Q6NVH7 229 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 CRIPAKQ8N1N5 446 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 BANK1Q8NDB2 785 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 CCDC148Q8NFR7 591 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 CLP1Q92989 425 aaKnown RBP25.45■■□□□ 1.66
SREBF1-214ENST00000486311 SLC26A6Q9BXS9 759 aa25.45■■□□□ 1.66
SREBF1-214ENST00000486311 ATP4AP20648 1035 aa25.44■■□□□ 1.66
SREBF1-214ENST00000486311 PAK2Q13177 524 aa25.44■■□□□ 1.66
SREBF1-214ENST00000486311 SMAP1Q8IYB5 467 aaPredicted RBP25.44■■□□□ 1.66
SREBF1-214ENST00000486311 RASGRP4Q8TDF6 673 aa25.44■■□□□ 1.66
SREBF1-214ENST00000486311 UIMC1Q96RL1 719 aa25.44■■□□□ 1.66
SREBF1-214ENST00000486311 C11orf84Q9BUA3 381 aaPredicted RBP25.44■■□□□ 1.66
SREBF1-214ENST00000486311 MAFBQ9Y5Q3 323 aaPredicted RBP25.44■■□□□ 1.66
SREBF1-214ENST00000486311 BRWD1Q9NSI6 2320 aa25.44■■□□□ 1.66
SREBF1-214ENST00000486311 ZBTB42B2RXF5 422 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 PPFIA3O75145 1194 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 KCNA5P22460 613 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 BTG3Q14201 252 aaPredicted RBP25.43■■□□□ 1.66
SREBF1-214ENST00000486311 PRR16Q569H4 304 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 FAM43BQ6ZT52 329 aaPredicted RBP25.43■■□□□ 1.66
SREBF1-214ENST00000486311 RUFY3Q7L099 469 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 NPAS4Q8IUM7 802 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 KIAA0319LQ8IZA0 1049 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 NCOA5Q9HCD5 579 aaKnown RBP25.43■■□□□ 1.66
SREBF1-214ENST00000486311 ZSWIM6Q9HCJ5 1215 aa25.43■■□□□ 1.66
SREBF1-214ENST00000486311 CCT2P78371 535 aaKnown RBP25.42■■□□□ 1.66
SREBF1-214ENST00000486311 TCEAL5Q5H9L2 206 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 LENG9Q96B70 501 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 LMAN2LQ9H0V9 348 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 NSUN3Q9H649 340 aaKnown RBP25.42■■□□□ 1.66
SREBF1-214ENST00000486311 SH3GLB2Q9NR46 395 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 VPS54Q9P1Q0 977 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 PCDHA10Q9Y5I2 948 aa25.42■■□□□ 1.66
SREBF1-214ENST00000486311 PSAPP07602 524 aa25.41■■□□□ 1.66
SREBF1-214ENST00000486311 TOB2Q14106 344 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms