RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 PGRMC1O00264 195 aaKnown RBP24.61■■□□□ 1.53
CLN5-202ENST00000485938 SART1O43290 800 aaKnown RBP24.61■■□□□ 1.53
CLN5-202ENST00000485938 FSBPO95073 299 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 HOXD13P35453 343 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 EXOC3L4Q17RC7 722 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 KCNV1Q6PIU1 500 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 MICALCLQ6ZW33 695 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 METTL13Q8N6R0 699 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.61■■□□□ 1.53
CLN5-202ENST00000485938 AP1M1Q9BXS5 423 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 GOLGA6L10A6NI86 522 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L15C9J2P7 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L13C9JLJ4 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L11C9JVI0 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L18D6R9N7 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L22D6RA61 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L17D6RBQ6 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L19D6RCP7 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L20D6RJB6 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L24Q0WX57 530 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 USP17L6PQ6QN14 398 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 DDX42Q86XP3 938 aaKnown RBP eCLIP24.6■■□□□ 1.53
CLN5-202ENST00000485938 PRPF38AQ8NAV1 312 aaKnown RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 NOC2LQ9Y3T9 749 aaKnown RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 CAPN7Q9Y6W3 813 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 CYP3A7-CYP3A51PA0A087WV96 503 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 GCOM1H8Y6P7 765 aaPredicted RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 FAM107AO95990 144 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 MYZAPP0CAP1 466 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 CYP3A7P24462 503 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 GIT2Q14161 759 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 KNOP1Q1ED39 458 aaKnown RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 KCTD1Q719H9 257 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 EPM2AIP1Q7L775 607 aaPredicted RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 PLCD3Q8N3E9 789 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 LRRC45Q96CN5 670 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 MBOAT7Q96N66 472 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 NEUROG2Q9H2A3 272 aa24.6■■□□□ 1.53
CLN5-202ENST00000485938 CCNL1Q9UK58 526 aaPredicted RBP24.6■■□□□ 1.53
CLN5-202ENST00000485938 ATP8B3O60423 1300 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 ANXA13P27216 316 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 EPHA7Q15375 998 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 PTPROQ16827 1216 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 MCTP2Q6DN12 878 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 SLFN11Q7Z7L1 901 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 RPGRQ92834 1020 aaKnown RBP24.59■■□□□ 1.53
CLN5-202ENST00000485938 USP21Q9UK80 565 aa24.59■■□□□ 1.53
CLN5-202ENST00000485938 FLOT1O75955 427 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 HPDP32754 393 aaPredicted RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 HDLBPQ00341 1268 aaKnown RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 ZNF844Q08AG5 666 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 ARFGAP2Q8N6H7 521 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 OR2W6PQ8NHA6 318 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 DDX47Q9H0S4 455 aaKnown RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 DDX4Q9NQI0 724 aaKnown RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 STXBP5LQ9Y2K9 1186 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 XRCC5P13010 732 aaKnown RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 RFC4P35249 363 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 SFR1Q86XK3 245 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 CATSPER3Q86XQ3 398 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 SIX2Q9NPC8 291 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 SERPINB13Q9UIV8 391 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 GGA2Q9UJY4 613 aa24.58■■□□□ 1.53
CLN5-202ENST00000485938 AJAP1Q9UKB5 411 aaPredicted RBP24.58■■□□□ 1.53
CLN5-202ENST00000485938 CCDC188H7C350 402 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 SHMT1P34896 483 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 JAM2P57087 298 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 PSMC6P62333 389 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 SPIRE1Q08AE8 756 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 SLFN12Q8IYM2 578 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 RASGEF1CQ8N431 466 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 PROCA1Q8NCQ7 364 aaPredicted RBP24.57■■□□□ 1.52
CLN5-202ENST00000485938 CENPHQ9H3R5 247 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 FBXL5Q9UKA1 691 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 BTAF1O14981 1849 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 KRIT1O00522 736 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 PDXKO00764 312 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 AKAP3O75969 853 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 SWT1Q5T5J6 900 aaKnown RBP24.57■■□□□ 1.52
CLN5-202ENST00000485938 PEX26Q7Z412 305 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 CEP89Q96ST8 783 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 REEP2Q9BRK0 252 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 ANO3Q9BYT9 981 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 GLT8D2Q9H1C3 349 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 SUCLA2Q9P2R7 463 aaPredicted RBP24.57■■□□□ 1.52
CLN5-202ENST00000485938 POLLQ9UGP5 575 aa24.57■■□□□ 1.52
CLN5-202ENST00000485938 MYO3BQ8WXR4 1341 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 A0A0A6YYK5 440 aaPredicted RBP24.56■■□□□ 1.52
CLN5-202ENST00000485938 E7EVH7 732 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 CTNNA1P35221 906 aaKnown RBP24.56■■□□□ 1.52
CLN5-202ENST00000485938 PRR5LQ6MZQ0 368 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 SLC12A6Q9UHW9 1150 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 TMCO5BA8MYB1 307 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 MYO1FO00160 1098 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 CALUO43852 315 aaPredicted RBP24.56■■□□□ 1.52
CLN5-202ENST00000485938 H2AFZP0C0S5 128 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 ITGA4P13612 1032 aa24.56■■□□□ 1.52
CLN5-202ENST00000485938 DCAF17Q5H9S7 520 aaPredicted RBP24.56■■□□□ 1.52
CLN5-202ENST00000485938 H2AFVQ71UI9 128 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms