RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 AGO4Q9HCK5 861 aaKnown RBP13.6□□□□□ -0.23
HLA-DOA-204ENST00000485901 BRMS1Q9HCU9 246 aa13.6□□□□□ -0.23
HLA-DOA-204ENST00000485901 PKD2L1Q9P0L9 805 aa13.6□□□□□ -0.23
HLA-DOA-204ENST00000485901 FAM50BQ9Y247 325 aa13.6□□□□□ -0.23
HLA-DOA-204ENST00000485901 NFASCO94856 1347 aa13.6□□□□□ -0.23
HLA-DOA-204ENST00000485901 CCDC194A0A1B0GVG4 234 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 PRR33A8MZF0 331 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 GNAT1P11488 350 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 DEFB103AP81534 67 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 SETQ01105 290 aaPredicted RBP13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 SP4Q02446 784 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 PRR16Q569H4 304 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 KRT40Q6A162 431 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 FAM178BQ8IXR5 827 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 TBCKQ8TEA7 893 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 MRPL38Q96DV4 380 aaKnown RBP13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 C16orf70Q9BSU1 422 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 JPH1Q9HDC5 661 aaPredicted RBP13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
HLA-DOA-204ENST00000485901 MYO7AQ13402 2215 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 IGLV3-22A0A075B6J6 115 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 H3BRB1 525 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 KRT2P35908 639 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 COL19A1Q14993 1142 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 APBB2Q92870 758 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZNF577Q9BSK1 485 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 TBC1D22BQ9NU19 505 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 SLC9A2Q9UBY0 812 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 PRKAG3Q9UGI9 489 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 RALGAPA2Q2PPJ7 1873 aa13.58□□□□□ -0.24
HLA-DOA-204ENST00000485901 CYP3A7-CYP3A51PA0A087WV96 503 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 H3BNC9 293 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 MMP1P03956 469 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 LGALS2P05162 132 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 CYP3A7P24462 503 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 ITGB3BPQ13352 177 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 MOXD1Q6UVY6 613 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 GJD3Q8N144 294 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 C8orf76Q96K31 380 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 RWDD3Q9Y3V2 267 aa13.57□□□□□ -0.24
HLA-DOA-204ENST00000485901 C17orf102A2RUQ5 167 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 EDIL3O43854 480 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 RPLP2P05387 115 aaKnown RBP13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 RB1P06400 928 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 TCF7P36402 384 aaPredicted RBP13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 ACTR2P61160 394 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 INF2Q27J81 1249 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 Q4G0T1 1027 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 DBF4BQ8NFT6 615 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 SEPT8Q92599 483 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 SMARCAD1Q9H4L7 1026 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 AZI2Q9H6S1 392 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 C11orf16Q9NQ32 467 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
HLA-DOA-204ENST00000485901 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 BTBD18B2RXH4 712 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 DHX15O43143 795 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 ATG7O95352 703 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 FOSBP53539 338 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 LETM2Q2VYF4 491 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 DIS3L2Q8IYB7 885 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 GLG1Q92896 1179 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 ATP6V0A1Q93050 837 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 LENG9Q96B70 501 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms