RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	KLHL33	A6NCF5	533 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	RASSF10	A6NK89	507 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567		F8W031	263 aa	Predicted RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	GOLGA6L22	H0YM25	854 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA12	O60330	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	MLC1	Q15049	377 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	FSCN1	Q16658	493 aa	Known RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	ZNF792	Q3KQV3	632 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PNMA8A	Q86V59	439 aa	Predicted RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PHYKPL	Q8IUZ5	450 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	CCAR1	Q8IX12	1150 aa	Known RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	AMOTL1	Q8IY63	956 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	MAGEB6	Q8N7X4	407 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	ARRDC4	Q8NCT1	418 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	FLAD1	Q8NFF5	587 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	ASB15	Q8WXK1	588 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	RTF1	Q92541	710 aa	Known RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	GBP4	Q96PP9	640 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	NUP88	Q99567	741 aa	Predicted RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	MS4A5	Q9H3V2	200 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	MSRA	Q9UJ68	235 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA8	Q9Y5G5	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA7	Q9Y5G6	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA6	Q9Y5G7	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA3	Q9Y5H0	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PCDHGA2	Q9Y5H1	932 aa		5.38	□□□□□ -1.55
FN1-222	ENST00000485567	PRAMEF25	A6NGN4	478 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	CAND2	O75155	1236 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	ATF3	P18847	181 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	MAPKAPK2	P49137	400 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	GRIN1	Q05586	938 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	TMEM62	Q0P6H9	643 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	TIGD7	Q6NT04	549 aa	Predicted RBP	5.37	□□□□□ -1.55
FN1-222	ENST00000485567	ESPNL	Q6ZVH7	1005 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	C14orf80	Q86SX3	495 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	CXorf67	Q86X51	503 aa	Predicted RBP	5.37	□□□□□ -1.55
FN1-222	ENST00000485567	MIB1	Q86YT6	1006 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	SIRT2	Q8IXJ6	389 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	CMIP	Q8IY22	773 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	CMTR2	Q8IYT2	770 aa	Known RBP	5.37	□□□□□ -1.55
FN1-222	ENST00000485567	MAML3	Q96JK9	1138 aa		5.37	□□□□□ -1.55
FN1-222	ENST00000485567	DBR1	Q9UK59	544 aa	Known RBP	5.37	□□□□□ -1.55
FN1-222	ENST00000485567	ABLIM1	O14639	778 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	ADAMTS4	O75173	837 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	H2AFY	O75367	372 aa	Known RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	MME	P08473	750 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	CT47B1	P0C2W7	299 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	ENPP1	P22413	925 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	AOAH	P28039	575 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	CYP2C19	P33261	490 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	GNAL	P38405	381 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	PRR5	P85299	388 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	DBP	Q10586	325 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	GTF2H3	Q13889	308 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	ODF1	Q14990	250 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	GFOD2	Q3B7J2	385 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	TTC38	Q5R3I4	469 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	EFCAB2	Q5VUJ9	269 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	TTLL7	Q6ZT98	887 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	FAM126B	Q8IXS8	530 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	C7orf31	Q8N865	590 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	TOE1	Q96GM8	510 aa	Known RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	RNF32	Q9H0A6	362 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	RXFP1	Q9HBX9	757 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	NGRN	Q9NPE2	291 aa	Known RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-222	ENST00000485567	PCMTD2	Q9NV79	361 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	DTL	Q9NZJ0	730 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	BTBD7	Q9P203	1132 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	GABBR1	Q9UBS5	961 aa		5.36	□□□□□ -1.55
FN1-222	ENST00000485567	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	UBA6	A0AVT1	1052 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	LCHN	A4D1U4	455 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	MAP4K4	O95819	1239 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	LRG1	P02750	347 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	TMEM253	P0C7T8	217 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	PF4V1	P10720	104 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	MTNR1B	P49286	362 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	GALK1	P51570	392 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	MANF	P55145	182 aa	Known RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	YBX1	P67809	324 aa	Known RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	RAB3GAP1	Q15042	981 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	UGT8	Q16880	541 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	RPTN	Q6XPR3	784 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	CILP2	Q8IUL8	1156 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	CCDC146	Q8IYE0	955 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	HSPBAP1	Q96EW2	488 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	INTS4	Q96HW7	963 aa	Known RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	RAX2	Q96IS3	184 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	KIRREL1	Q96J84	757 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	FOXB1	Q99853	325 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	SLC6A17	Q9H1V8	727 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	KLHL14	Q9P2G3	628 aa		5.35	□□□□□ -1.55
FN1-222	ENST00000485567	NOB1	Q9ULX3	412 aa	Known RBP	5.35	□□□□□ -1.55
FN1-222	ENST00000485567	PRAMEF22	A3QJZ6	481 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms