RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 TMEM192Q8IY95 271 aa29.23■■■□□ 2.27
HLA-F-227ENST00000485513 PHKBQ93100 1093 aa29.23■■■□□ 2.27
HLA-F-227ENST00000485513 MRPL38Q96DV4 380 aaKnown RBP29.23■■■□□ 2.27
HLA-F-227ENST00000485513 TRPV2Q9Y5S1 764 aa29.23■■■□□ 2.27
HLA-F-227ENST00000485513 IGLV3-22A0A075B6J6 115 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 ADAMTS3O15072 1205 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 GNA11P29992 359 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 PTPROQ16827 1216 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 FAM160B1Q5W0V3 765 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 FIBCD1Q8N539 461 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 AGO3Q9H9G7 860 aaKnown RBP29.22■■■□□ 2.27
HLA-F-227ENST00000485513 SQORQ9Y6N5 450 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 RALGAPA2Q2PPJ7 1873 aa29.22■■■□□ 2.27
HLA-F-227ENST00000485513 TTC3P53804 2025 aa29.21■■■□□ 2.27
HLA-F-227ENST00000485513 H3BNC9 293 aa29.21■■■□□ 2.27
HLA-F-227ENST00000485513 IPO5O00410 1097 aaKnown RBP29.21■■■□□ 2.27
HLA-F-227ENST00000485513 CD52P31358 61 aa29.21■■■□□ 2.27
HLA-F-227ENST00000485513 TMEM62Q0P6H9 643 aa29.21■■■□□ 2.27
HLA-F-227ENST00000485513 GPM6BQ13491 265 aa29.21■■■□□ 2.27
HLA-F-227ENST00000485513 LOXHD1Q8IVV2 1947 aa29.2■■■□□ 2.27
HLA-F-227ENST00000485513 SMIM35A0A1B0GVV1 85 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 DHX15O43143 795 aaKnown RBP29.2■■■□□ 2.26
HLA-F-227ENST00000485513 HBP1O60381 514 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 NTRK3Q16288 839 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 MTHFD1LQ6UB35 978 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 CCDC60Q8IWA6 550 aaPredicted RBP29.2■■■□□ 2.26
HLA-F-227ENST00000485513 UIMC1Q96RL1 719 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 ZNF577Q9BSK1 485 aa29.2■■■□□ 2.26
HLA-F-227ENST00000485513 RNF26Q9BY78 433 aaPredicted RBP29.2■■■□□ 2.26
HLA-F-227ENST00000485513 PPFIA3O75145 1194 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 SETQ01105 290 aaPredicted RBP29.19■■■□□ 2.26
HLA-F-227ENST00000485513 MIS18BP1Q6P0N0 1132 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 PDXDC2PQ6P474 469 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 NME8Q8N427 588 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 BICD2Q8TD16 824 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 ATP8B4Q8TF62 1192 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 SLC26A6Q9BXS9 759 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 CELF4Q9BZC1 486 aaKnown RBP29.19■■■□□ 2.26
HLA-F-227ENST00000485513 UBE2ZQ9H832 354 aaPredicted RBP29.19■■■□□ 2.26
HLA-F-227ENST00000485513 ZNF302Q9NR11 478 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 ADGRA3Q8IWK6 1321 aa29.19■■■□□ 2.26
HLA-F-227ENST00000485513 IFNAR1P17181 557 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 KLRC1P26715 233 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 PDIA3P30101 505 aaKnown RBP29.18■■■□□ 2.26
HLA-F-227ENST00000485513 CCDC148Q8NFR7 591 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 FTHL17Q9BXU8 183 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 TBC1D22BQ9NU19 505 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 IGSF9BQ9UPX0 1349 aa29.18■■■□□ 2.26
HLA-F-227ENST00000485513 CTNNB1P35222 781 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 EVCP57679 992 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 CCT2P78371 535 aaKnown RBP29.17■■■□□ 2.26
HLA-F-227ENST00000485513 KRT76Q01546 638 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 TIGD5Q53EQ6 642 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 SWSAP1Q6NVH7 229 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 RASGRP4Q8TDF6 673 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 LINC01599Q8WXQ3 324 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 RC3H2Q9HBD1 1191 aaKnown RBP29.17■■■□□ 2.26
HLA-F-227ENST00000485513 NCOA5Q9HCD5 579 aaKnown RBP29.17■■■□□ 2.26
HLA-F-227ENST00000485513 PADI3Q9ULW8 664 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 KDM3AQ9Y4C1 1321 aa29.17■■■□□ 2.26
HLA-F-227ENST00000485513 COL1A2P08123 1366 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 MYH9P35579 1960 aaKnown RBP29.16■■■□□ 2.26
HLA-F-227ENST00000485513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.16■■■□□ 2.26
HLA-F-227ENST00000485513 PAK2Q13177 524 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 PRR16Q569H4 304 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 ZNF746Q6NUN9 644 aaPredicted RBP29.16■■■□□ 2.26
HLA-F-227ENST00000485513 RUFY3Q7L099 469 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 TCEAL9Q9UHQ7 104 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 RWDD3Q9Y3V2 267 aa29.16■■■□□ 2.26
HLA-F-227ENST00000485513 EPB41L2O43491 1005 aaKnown RBP29.15■■■□□ 2.26
HLA-F-227ENST00000485513 CIITAP33076 1130 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 BTG3Q14201 252 aaPredicted RBP29.15■■■□□ 2.26
HLA-F-227ENST00000485513 ZNF484Q5JVG2 852 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 RTN4RL1Q86UN2 441 aaPredicted RBP29.15■■■□□ 2.26
HLA-F-227ENST00000485513 CKAP2LQ8IYA6 745 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 BANK1Q8NDB2 785 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 ZNF689Q96CS4 500 aaPredicted RBP29.15■■■□□ 2.26
HLA-F-227ENST00000485513 VPS54Q9P1Q0 977 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 EVPLQ92817 2033 aa29.15■■■□□ 2.26
HLA-F-227ENST00000485513 C5orf67F2Z3F1 127 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 DGKIO75912 1065 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 RB1P06400 928 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 LINC00271P0C7V0 271 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 KCNA5P22460 613 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 BMPR1AP36894 532 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 SMAP1Q8IYB5 467 aaPredicted RBP29.14■■■□□ 2.26
HLA-F-227ENST00000485513 CLP1Q92989 425 aaKnown RBP29.14■■■□□ 2.26
HLA-F-227ENST00000485513 ZSWIM6Q9HCJ5 1215 aa29.14■■■□□ 2.26
HLA-F-227ENST00000485513 ATP4AP20648 1035 aa29.13■■■□□ 2.25
HLA-F-227ENST00000485513 TOB2Q14106 344 aaPredicted RBP29.13■■■□□ 2.25
HLA-F-227ENST00000485513 NPAS4Q8IUM7 802 aa29.13■■■□□ 2.25
HLA-F-227ENST00000485513 KIAA0319LQ8IZA0 1049 aa29.13■■■□□ 2.25
HLA-F-227ENST00000485513 C11orf84Q9BUA3 381 aaPredicted RBP29.13■■■□□ 2.25
HLA-F-227ENST00000485513 SH3GLB2Q9NR46 395 aa29.13■■■□□ 2.25
HLA-F-227ENST00000485513 MAFBQ9Y5Q3 323 aaPredicted RBP29.13■■■□□ 2.25
HLA-F-227ENST00000485513 MYO7AQ13402 2215 aa29.12■■■□□ 2.25
HLA-F-227ENST00000485513 ZBTB42B2RXF5 422 aa29.12■■■□□ 2.25
HLA-F-227ENST00000485513 PSAPP07602 524 aa29.12■■■□□ 2.25
HLA-F-227ENST00000485513 LEXMQ3ZCV2 418 aa29.12■■■□□ 2.25
HLA-F-227ENST00000485513 TCEAL5Q5H9L2 206 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms