RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 PODNQ7Z5L7 613 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 PPFIBP1Q86W92 1011 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 ZNF227Q86WZ6 799 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 RPAP2Q8IXW5 612 aaPredicted RBP6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 PI4K2BQ8TCG2 481 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 COG1Q8WTW3 980 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 OSBP2Q969R2 916 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 ACSF2Q96CM8 615 aaPredicted RBP6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 HHIPL1Q96JK4 782 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 FGD4Q96M96 766 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 HAUS7Q99871 368 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 LGR4Q9BXB1 951 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 TRIM8Q9BZR9 551 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 ZNF700Q9H0M5 742 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 TRIM39Q9HCM9 518 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 CNNM1Q9NRU3 951 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 KRT82Q9NSB4 513 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 POLLQ9UGP5 575 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 SUSD2Q9UGT4 822 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 HACL1Q9UJ83 578 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 PNMA2Q9UL42 364 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 PHF24Q9UPV7 400 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 SPEF1Q9Y4P9 236 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 MED23Q9ULK4 1368 aa6.66□□□□□ -1.34
NHLRC3-205ENST00000485407 H3BRJ5 948 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 EYA2O00167 538 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 NOP56O00567 594 aaKnown RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 NEMP1O14524 444 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SRGAP3O43295 1099 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 PRPF3O43395 683 aaKnown RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 EFCAB14O75071 495 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 UFL1O94874 794 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 FOSP01100 380 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 MAOBP27338 520 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 IL15P40933 162 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 MMP14P50281 582 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 ATP8B2P98198 1209 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 PKN2Q16513 984 aaKnown RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 TRIM61Q5EBN2 209 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 C10orf62Q5T681 223 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SYDE2Q5VT97 1194 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SPTY2D1Q68D10 685 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 UBE2R2Q712K3 238 aaPredicted RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 FGD2Q7Z6J4 655 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 DGKHQ86XP1 1220 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 TMEM192Q8IY95 271 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 GPC2Q8N158 579 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 MAGEB6Q8N7X4 407 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 OR2W6PQ8NHA6 318 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 PANK1Q8TE04 598 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SSH3Q8TE77 659 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 COA1Q9GZY4 146 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 GBP3Q9H0R5 595 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 IFT22Q9H7X7 185 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 FBRSQ9HAH7 460 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SAGE1Q9NXZ1 904 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 APEX2Q9UBZ4 518 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 IP6K2Q9UHH9 426 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 SLC6A14Q9UN76 642 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 TNNQ9UQP3 1299 aa6.65□□□□□ -1.34
NHLRC3-205ENST00000485407 ZNF804BA4D1E1 1349 aa6.65□□□□□ -1.35
NHLRC3-205ENST00000485407 DUOX1Q9NRD9 1551 aa6.65□□□□□ -1.35
NHLRC3-205ENST00000485407 LAMA3Q16787 3333 aa6.65□□□□□ -1.35
NHLRC3-205ENST00000485407 COL4A1P02462 1669 aa6.65□□□□□ -1.35
NHLRC3-205ENST00000485407 SPEF2Q9C093 1822 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 GABRDO14764 452 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 ZNF862O60290 1169 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 PDE8BO95263 885 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 IFIT2P09913 472 aaKnown RBP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 LIG1P18858 919 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 GBP1P32455 592 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 IGFALSP35858 605 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 MAP2K3P46734 347 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 KCNJ4P48050 445 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 RRP1P56182 461 aaKnown RBP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 GABREP78334 506 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 C19orf57Q0VDD7 668 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 TNIP1Q15025 636 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 AOC3Q16853 763 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 SAPCD2Q86UD0 394 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 CCDC144CPQ8IYA2 1237 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 VGLL2Q8N8G2 317 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 SNX27Q96L92 541 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 GNL3LQ9NVN8 582 aaKnown RBP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 BCCIPQ9P287 314 aaKnown RBP eCLIP6.64□□□□□ -1.35
NHLRC3-205ENST00000485407 A0A1B0GUL6 1792 aa6.63□□□□□ -1.35
NHLRC3-205ENST00000485407 BLACEA4D250 179 aa6.63□□□□□ -1.35
NHLRC3-205ENST00000485407 VSTM5A8MXK1 200 aa6.63□□□□□ -1.35
NHLRC3-205ENST00000485407 C9IYK1 514 aa6.63□□□□□ -1.35
NHLRC3-205ENST00000485407 ZNF609O15014 1411 aa6.63□□□□□ -1.35
NHLRC3-205ENST00000485407 TBX1O43435 398 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms