RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 CDY2AQ9Y6F7 541 aa18.04■□□□□ 0.48
SIK3-211ENST00000485363 MYH9P35579 1960 aaKnown RBP18.03■□□□□ 0.48
SIK3-211ENST00000485363 M0QZ92 97 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 LPXNO60711 386 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 UPP2O95045 317 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 CIITAP33076 1130 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 NLRP5P59047 1200 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 SKIV2LQ15477 1246 aaKnown RBP18.03■□□□□ 0.48
SIK3-211ENST00000485363 PRR16Q569H4 304 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 FBXO47Q5MNV8 452 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 KRT40Q6A162 431 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
SIK3-211ENST00000485363 TSHZ1Q6ZSZ6 1077 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 SP7Q8TDD2 431 aaPredicted RBP18.03■□□□□ 0.48
SIK3-211ENST00000485363 GDPD5Q8WTR4 605 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 ZNF302Q9NR11 478 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 PDRG1Q9NUG6 133 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 LMCD1Q9NZU5 365 aa18.03■□□□□ 0.48
SIK3-211ENST00000485363 HBP1O60381 514 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
SIK3-211ENST00000485363 SWSAP1Q6NVH7 229 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 PDXDC2PQ6P474 469 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 MTHFD1LQ6UB35 978 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 CCDC60Q8IWA6 550 aaPredicted RBP18.02■□□□□ 0.48
SIK3-211ENST00000485363 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
SIK3-211ENST00000485363 ATP8B4Q8TF62 1192 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 UIMC1Q96RL1 719 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 TRPV2Q9Y5S1 764 aa18.02■□□□□ 0.48
SIK3-211ENST00000485363 SPTBN5Q9NRC6 3674 aaKnown RBP18.01■□□□□ 0.47
SIK3-211ENST00000485363 SMIM35A0A1B0GVV1 85 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 DEXIO95424 95 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 KRT76Q01546 638 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 STK3Q13188 491 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 NME8Q8N427 588 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 FBXO22Q8NEZ5 403 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 LARP6Q9BRS8 491 aaKnown RBP18.01■□□□□ 0.47
SIK3-211ENST00000485363 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 C22orf23Q9BZE7 217 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 SQORQ9Y6N5 450 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 LOXHD1Q8IVV2 1947 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 COL1A2P08123 1366 aa18.01■□□□□ 0.47
SIK3-211ENST00000485363 COL4A6Q14031 1691 aa18■□□□□ 0.47
SIK3-211ENST00000485363 PSAPP07602 524 aa18■□□□□ 0.47
SIK3-211ENST00000485363 KLRC1P26715 233 aa18■□□□□ 0.47
SIK3-211ENST00000485363 USP11P51784 963 aa18■□□□□ 0.47
SIK3-211ENST00000485363 AAK1Q2M2I8 961 aa18■□□□□ 0.47
SIK3-211ENST00000485363 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
SIK3-211ENST00000485363 CKAP2LQ8IYA6 745 aa18■□□□□ 0.47
SIK3-211ENST00000485363 CELF4Q9BZC1 486 aaKnown RBP18■□□□□ 0.47
SIK3-211ENST00000485363 PCDHA4Q9UN74 947 aa18■□□□□ 0.47
SIK3-211ENST00000485363 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
SIK3-211ENST00000485363 NLRC5Q86WI3 1866 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 ENPP3O14638 875 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 CD52P31358 61 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 TMEM62Q0P6H9 643 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
SIK3-211ENST00000485363 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
SIK3-211ENST00000485363 LENG9Q96B70 501 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 FTHL17Q9BXU8 183 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 AGO3Q9H9G7 860 aaKnown RBP17.99■□□□□ 0.47
SIK3-211ENST00000485363 COG5Q9UP83 839 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 SAMM50Q9Y512 469 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 PCDHA10Q9Y5I2 948 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 XIRP2A4UGR9 3374 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 TTC28Q96AY4 2481 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 EVPLQ92817 2033 aa17.99■□□□□ 0.47
SIK3-211ENST00000485363 KDM3AQ9Y4C1 1321 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 TTC3P53804 2025 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 CDKL5O76039 1030 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 ATP4AP20648 1035 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 EPC2Q52LR7 807 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 GALNT17Q6IS24 598 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 BLIDQ8IZY5 108 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 RALGAPA2Q2PPJ7 1873 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 IGSF9BQ9UPX0 1349 aa17.98■□□□□ 0.47
SIK3-211ENST00000485363 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 MSH4O15457 936 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 ANAPC15P60006 121 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 TFF2Q03403 129 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 PAK2Q13177 524 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 FIBCD1Q8N539 461 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 DAGLBQ8NCG7 672 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 RIT2Q99578 217 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
SIK3-211ENST00000485363 GABBR1Q9UBS5 961 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 PADI3Q9ULW8 664 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 CEP131Q9UPN4 1083 aa17.97■□□□□ 0.47
SIK3-211ENST00000485363 EDIL3O43854 480 aa17.96■□□□□ 0.47
SIK3-211ENST00000485363 GAS7O60861 476 aa17.96■□□□□ 0.47
SIK3-211ENST00000485363 SCRN1Q12765 414 aa17.96■□□□□ 0.47
SIK3-211ENST00000485363 PTPROQ16827 1216 aa17.96■□□□□ 0.47
SIK3-211ENST00000485363 FAM43BQ6ZT52 329 aaPredicted RBP17.96■□□□□ 0.47
SIK3-211ENST00000485363 TRMT1LQ7Z2T5 733 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms