RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TIPRLO75663 272 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 TPM2P07951 284 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 RGS2P41220 211 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 RXRGP48443 463 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 GHRHRQ02643 423 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 ZKSCAN8Q15776 578 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-205ENST00000485055 IGF2-ASQ6U949 168 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 RIOX2Q8IUF8 465 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 ALKBH8Q96BT7 664 aaKnown RBP6.01□□□□□ -1.45
CCDC39-205ENST00000485055 P2RX7Q99572 595 aaKnown RBP6.01□□□□□ -1.45
CCDC39-205ENST00000485055 ARHGAP39Q9C0H5 1083 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 CCDC113Q9H0I3 377 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 RMI1Q9H9A7 625 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 CABP5Q9NP86 173 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 CEP72Q9P209 647 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 CPA4Q9UI42 421 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 DNAJC25-GNG10A0A024R161 153 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 F5H423 210 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-205ENST00000485055 MBD4O95243 580 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 DGKGP49619 791 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 PLCD1P51178 756 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 COG2Q14746 738 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 OXLD1Q5BKU9 147 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 BTNL9Q6UXG8 535 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 PLEKHH3Q7Z736 793 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 ZBTB46Q86UZ6 589 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 C11orf74Q86VG3 221 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 MAPKAPK5Q8IW41 473 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 LCORLQ8N3X6 602 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 GMCL1Q96IK5 515 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 HTATIP2Q9BUP3 242 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 BLOC1S4Q9NUP1 217 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 PALD1Q9ULE6 856 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 PHTF1Q9UMS5 762 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 PLAAQ9Y263 795 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 VCAM1P19320 739 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 CAPN3P20807 821 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 EIF4BP23588 611 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 CDK8P49336 464 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 ROR1Q01973 937 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 APBA1Q02410 837 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PRKCZQ05513 592 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 IQCEQ6IPM2 695 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 RTL10Q7L3V2 364 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM22Q8IYM9 498 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TTC13Q8NBP0 860 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 NEDD1Q8NHV4 660 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 SRRTQ9BXP5 876 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 RANBP17Q9H2T7 1088 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 GABRQQ9UN88 632 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 MINDY4BA8MYZ0 360 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 CST5P28325 142 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 FLT3LGP49771 235 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 HMGCS2P54868 508 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 HSD17B7P56937 341 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 LMNB2Q03252 620 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 STRN3Q13033 797 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PDE1CQ14123 709 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 C8orf34Q49A92 452 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 LHX8Q68G74 356 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 FAM109BQ6ICB4 259 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 GADL1Q6ZQY3 521 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TOGARAM2Q6ZUX3 1019 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 SRLQ86TD4 932 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 SAMD14Q8IZD0 417 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 ARL6IP6Q8N6S5 226 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 LSM14AQ8ND56 463 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 RNF217Q8TC41 542 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 COG1Q8WTW3 980 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 CPLX3Q8WVH0 158 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 ZMAT2Q96NC0 199 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 MAP3K14Q99558 947 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM56Q9BRZ2 755 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 TSEN34Q9BSV6 310 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 UPF3AQ9H1J1 476 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 RRN3Q9NYV6 651 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PRDM4Q9UKN5 801 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PPP1R9AQ9ULJ8 1098 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PPT2Q9UMR5 302 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 TRPC6Q9Y210 931 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 SYNGAP1Q96PV0 1343 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 COL4A6Q14031 1691 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 J3KRW8 73 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 GABRDO14764 452 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 FOXP2O15409 715 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 IDH1O75874 414 aaKnown RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 EYA4O95677 639 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 GH2P01242 217 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 PYGLP06737 847 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 CYP2C8P10632 490 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 IRS1P35568 1242 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 SAFBQ15424 915 aaKnown RBP eCLIP6□□□□□ -1.45
CCDC39-205ENST00000485055 ELF2Q15723 593 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 LARP7Q4G0J3 582 aaKnown RBP eCLIP6□□□□□ -1.45
CCDC39-205ENST00000485055 CCDC178Q5BJE1 867 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 GPR142Q7Z601 462 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 GALNT5Q7Z7M9 940 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 CRACR2BQ8N4Y2 399 aaPredicted RBP6□□□□□ -1.45
CCDC39-205ENST00000485055 RAET1EQ8TD07 263 aa6□□□□□ -1.45
CCDC39-205ENST00000485055 MGARPQ8TDB4 240 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms