RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
DDR1-246ENST00000485023 MAFBQ9Y5Q3 323 aaPredicted RBP18.3■□□□□ 0.52
DDR1-246ENST00000485023 TRIP12Q14669 1992 aaPredicted RBP18.3■□□□□ 0.52
DDR1-246ENST00000485023 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 HBP1O60381 514 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 NEMFO60524 1076 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 PRKCEQ02156 737 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 TMEM62Q0P6H9 643 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 HAS1Q92839 578 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
DDR1-246ENST00000485023 OSBPL7Q9BZF2 842 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
DDR1-246ENST00000485023 FOXP1Q9H334 677 aaPredicted RBP18.29■□□□□ 0.52
DDR1-246ENST00000485023 KIF3AQ9Y496 699 aa18.29■□□□□ 0.52
DDR1-246ENST00000485023 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
DDR1-246ENST00000485023 EML1O00423 815 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 ZNF862O60290 1169 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 OATP04181 439 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 ACTN1P12814 892 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 MCM7P33993 719 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 CALCRLQ16602 461 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 TCTN1Q2MV58 587 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 RASIP1Q5U651 963 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 NCAPH2Q6IBW4 605 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 TAF2Q6P1X5 1199 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 B3GNT9Q6UX72 402 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 Q7L0L9 218 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 FAM20AQ96MK3 541 aa18.28■□□□□ 0.52
DDR1-246ENST00000485023 TMEM150BA6NC51 233 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 H3BQV1 296 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 BAG4O95429 457 aaKnown RBP18.27■□□□□ 0.52
DDR1-246ENST00000485023 KLRC1P26715 233 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 NBR1Q14596 966 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 MTHFD1LQ6UB35 978 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 RSPH3Q86UC2 560 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
DDR1-246ENST00000485023 SEPT9Q9UHD8 586 aaPredicted RBP18.27■□□□□ 0.52
DDR1-246ENST00000485023 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.27■□□□□ 0.52
DDR1-246ENST00000485023 SLC4A7Q9Y6M7 1214 aa18.27■□□□□ 0.52
DDR1-246ENST00000485023 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 DLL1O00548 723 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 TBX3O15119 743 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 CAND2O75155 1236 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 CXCL10P02778 98 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 PBX2P40425 430 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 TXKP42681 527 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 PPP2R5CQ13362 524 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 ZNF174Q15697 407 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 ZNF484Q5JVG2 852 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 CNKSR3Q6P9H4 555 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 SLFN12Q8IYM2 578 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 FAM161BQ96MY7 647 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 SH2D3AQ9BRG2 576 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 PCDHA2Q9Y5H9 948 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 COL1A2P08123 1366 aa18.26■□□□□ 0.51
DDR1-246ENST00000485023 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 PARNO95453 639 aaKnown RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 C22orf31O95567 290 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 CHRNA1P02708 482 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 GHRP10912 638 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 MRPS6P82932 125 aaKnown RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 SMAD3P84022 425 aaKnown RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 TTC38Q5R3I4 469 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 DBF4BQ8NFT6 615 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
DDR1-246ENST00000485023 CDY2AQ9Y6F7 541 aa18.25■□□□□ 0.51
DDR1-246ENST00000485023 RABGGTBP53611 331 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 CYP4A11Q02928 519 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 MGAT3Q09327 533 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 MTERF2Q49AM1 385 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
DDR1-246ENST00000485023 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
DDR1-246ENST00000485023 NRBP2Q9NSY0 501 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 PCDHA12Q9UN75 941 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 CEP131Q9UPN4 1083 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 GINS2Q9Y248 185 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 SZT2Q5T011 3432 aa18.24■□□□□ 0.51
DDR1-246ENST00000485023 SMIM35A0A1B0GVV1 85 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 M0QZ92 97 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
DDR1-246ENST00000485023 DNAJB2P25686 324 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 U2AF2P26368 475 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDR1-246ENST00000485023 KCNJ6P48051 423 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 CLCN3P51790 818 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 WDR5P61964 334 aaKnown RBP18.23■□□□□ 0.51
DDR1-246ENST00000485023 PSMC5P62195 406 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 SPIRE1Q08AE8 756 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 CUL4AQ13619 759 aa18.23■□□□□ 0.51
DDR1-246ENST00000485023 FAM26DQ5JW98 314 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms