RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CSF2RBP32927 897 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 MEOX1P50221 254 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 KCNQ1P51787 676 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 RRADP55042 308 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 HERVK_113P62684 666 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 LACTBP83111 547 aaPredicted RBP6.26□□□□□ -1.41
SMC4-215ENST00000484799 ICAM4Q14773 271 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 USP51Q70EK9 711 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 TAX1BP1Q86VP1 789 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 PALM2Q8IXS6 379 aa6.26□□□□□ -1.41
SMC4-215ENST00000484799 THAP3Q8WTV1 239 aaPredicted RBP6.26□□□□□ -1.41
SMC4-215ENST00000484799 SLC12A8A0AV02 714 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 HMGCRP04035 888 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 ADCY8P40145 1251 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 ZXDAP98168 799 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 TMEM132BQ14DG7 1078 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 RTKN2Q8IZC4 609 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 CALML6Q8TD86 181 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 GNRHR2Q96P88 292 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 SSBP3Q9BWW4 388 aaPredicted RBP6.25□□□□□ -1.41
SMC4-215ENST00000484799 KATNBL1Q9H079 304 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 UCKL1Q9NWZ5 548 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 COQ6Q9Y2Z9 468 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 TSC22D4Q9Y3Q8 395 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 NR2E1Q9Y466 385 aa6.25□□□□□ -1.41
SMC4-215ENST00000484799 MUSKO15146 869 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 NPTXRO95502 500 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 FSHBP01225 129 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 ECE1P42892 770 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
SMC4-215ENST00000484799 BTBD2Q9BX70 525 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 KCNH7Q9NS40 1196 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 PUF60Q9UHX1 559 aaKnown RBP6.24□□□□□ -1.41
SMC4-215ENST00000484799 FAM184BQ9ULE4 1060 aa6.24□□□□□ -1.41
SMC4-215ENST00000484799 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
SMC4-215ENST00000484799 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 PRAMEF22A3QJZ6 481 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 B4E1Z4 1266 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 C1QTNF3-AMACRE9PGA6 284 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 FOXP2O15409 715 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 CDC14BO60729 498 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 CNOT4O95628 575 aaKnown RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 ZNF888P0CJ79 500 aaPredicted RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 SELENOPP49908 381 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 SERINC3Q13530 473 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 RASA3Q14644 834 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 DDX53Q86TM3 631 aaKnown RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 NEIL1Q96FI4 390 aaPredicted RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 MRFAP1L1Q96HT8 127 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 GBP4Q96PP9 640 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 MRPL4Q9BYD3 311 aaKnown RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 CELF4Q9BZC1 486 aaKnown RBP6.23□□□□□ -1.41
SMC4-215ENST00000484799 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 CDC42EP3Q9UKI2 254 aa6.23□□□□□ -1.41
SMC4-215ENST00000484799 KRT37O76014 449 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 RASGRP1O95267 797 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 C4BPAP04003 597 aaKnown RBP6.22□□□□□ -1.41
SMC4-215ENST00000484799 CR2P20023 1033 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 AOAHP28039 575 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 GDF5P43026 501 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 MAP3K12Q12852 859 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 TOP3AQ13472 1001 aaPredicted RBP6.22□□□□□ -1.41
SMC4-215ENST00000484799 PRKD1Q15139 912 aaPredicted RBP6.22□□□□□ -1.41
SMC4-215ENST00000484799 SPRED1Q7Z699 444 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 DNAJC2Q99543 621 aaKnown RBP6.22□□□□□ -1.41
SMC4-215ENST00000484799 SMURF1Q9HCE7 757 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 PTPN22Q9Y2R2 807 aa6.22□□□□□ -1.41
SMC4-215ENST00000484799 A0A0G2JNJ9 132 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 PATE3B3GLJ2 98 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 MMEP08473 750 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 FLT3P36888 993 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 ETV4P43268 484 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 HHEXQ03014 270 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 ARHGAP44Q17R89 818 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 USP30Q70CQ3 517 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 IGSF22Q8N9C0 903 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 Q8TCH9 128 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 E2F7Q96AV8 911 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 ADOQ96SZ5 270 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 ZDHHC5Q9C0B5 715 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 OSBPL2Q9H1P3 480 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 Q9UFV3 132 aa6.21□□□□□ -1.42
SMC4-215ENST00000484799 MATN3O15232 486 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 AMHP03971 560 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 MC4RP32245 332 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 IL13RA1P78552 427 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 CD83Q01151 205 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 NOLC1Q14978 699 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMC4-215ENST00000484799 C2orf27AQ580R0 203 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 TCTN3Q6NUS6 607 aa6.2□□□□□ -1.42
SMC4-215ENST00000484799 UBE2R2Q712K3 238 aaPredicted RBP6.2□□□□□ -1.42
SMC4-215ENST00000484799 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms