RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PPFIA1Q13136 1202 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 GRIK4Q16099 956 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MARCH8Q5T0T0 291 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PCNX4Q63HM2 1172 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TSHZ1Q6ZSZ6 1077 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CRIPAKQ8N1N5 446 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TMTC2Q8N394 836 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SRBD1Q8N5C6 995 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ATOH1Q92858 354 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PHF7Q9BWX1 381 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ANO2Q9NQ90 1003 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TUBE1Q9UJT0 475 aa17.58■□□□□ 0.4
HLA-DQB1-208ENST00000484729 KAT6AQ92794 2004 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MEIS2O14770 477 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CALM1P0DP23 149 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CALM2P0DP24 149 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CALM3P0DP25 149 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SMARCA1P28370 1054 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 AVPR2P30518 371 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 NAALADL2Q58DX5 795 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 LRRC2Q9BYS8 371 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 FAM49AQ9H0Q0 323 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TLE6Q9H808 572 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SLC12A7Q9Y666 1083 aa17.57■□□□□ 0.4
HLA-DQB1-208ENST00000484729 H0Y858 1186 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ATP9AO75110 1047 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PDGFBP01127 241 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 LIFRP42702 1097 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 IGBP1P78318 339 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MRPS6P82932 125 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 XRRA1Q6P2D8 792 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MICU3Q86XE3 530 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CCDC82Q8N4S0 544 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 VN1R2Q8NFZ6 395 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MICAL1Q8TDZ2 1067 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PSTPIP2Q9H939 334 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TLR9Q9NR96 1032 aa17.56■□□□□ 0.4
HLA-DQB1-208ENST00000484729 GSTTP1A0A1W2PQM5 241 aa17.55■□□□□ 0.4
HLA-DQB1-208ENST00000484729 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
HLA-DQB1-208ENST00000484729 MBLAC1A4D2B0 266 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TMEM62Q0P6H9 643 aa17.55■□□□□ 0.4
HLA-DQB1-208ENST00000484729 UBE2SQ16763 222 aa17.55■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PLXNA4Q9HCM2 1894 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SP100P23497 879 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 HEATR3Q7Z4Q2 680 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 GIMAP8Q8ND71 665 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SUSD6Q92537 303 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 GLG1Q92896 1179 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 GPRASP2Q96D09 838 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ERAP1Q9NZ08 941 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PKD2L1Q9P0L9 805 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PADI3Q9ULW8 664 aa17.54■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SPDYE3A6NKU9 549 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SCG2P13521 617 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 KCNA2P16389 499 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SYNE3Q6ZMZ3 975 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 FANCBQ8NB91 859 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ATP8B4Q8TF62 1192 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 CDHR1Q96JP9 859 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 APOL5Q9BWW9 433 aa17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQB1-208ENST00000484729 INSRRP14616 1297 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ERVFC1P60507 584 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SPOUT1Q5T280 376 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 IER5Q5VY09 327 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 FTHL17Q9BXU8 183 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TMX1Q9H3N1 280 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 HCSTQ9UBK5 93 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 LRFN2Q9ULH4 789 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 TRPV2Q9Y5S1 764 aa17.52■□□□□ 0.4
HLA-DQB1-208ENST00000484729 ITGB5P18084 799 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 PLXNA3P51805 1871 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 PAK2Q13177 524 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 MTMR1Q13613 665 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 DUSP6Q16828 381 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 TMEM266Q2M3C6 531 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 ASCL5Q7RTU5 278 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
HLA-DQB1-208ENST00000484729 TCEANC2Q96MN5 208 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms