RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
HDAC1-209ENST00000484305 JAK2O60674 1132 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 CA3P07451 260 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-209ENST00000484305 Q4G0T1 1027 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 PPP2R2DQ66LE6 453 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 PDXDC2PQ6P474 469 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-209ENST00000484305 ATP8B4Q8TF62 1192 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 WASF1Q92558 559 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 TNPO1Q92973 898 aaKnown RBP14.6□□□□□ -0.07
HDAC1-209ENST00000484305 MBOAT7Q96N66 472 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 RIT2Q99578 217 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 FAM49AQ9H0Q0 323 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-209ENST00000484305 PRDM12Q9H4Q4 367 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 SAMM50Q9Y512 469 aa14.6□□□□□ -0.07
HDAC1-209ENST00000484305 MAFBQ9Y5Q3 323 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-209ENST00000484305 CCDC194A0A1B0GVG4 234 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 ZBTB42B2RXF5 422 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 HBP1O60381 514 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 GAS7O60861 476 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 EFCAB14O75071 495 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 PSMD10O75832 226 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 ARHGEF15O94989 841 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 PSAPP07602 524 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 FOSL2P15408 326 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 MGAT3Q09327 533 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
HDAC1-209ENST00000484305 LRCH2Q5VUJ6 765 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 MTHFD1LQ6UB35 978 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.59□□□□□ -0.075e-7■■■■■ 32.6
HDAC1-209ENST00000484305 TRMT1LQ7Z2T5 733 aaKnown RBP14.59□□□□□ -0.07
HDAC1-209ENST00000484305 RSPH3Q86UC2 560 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 UNC45AQ9H3U1 944 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 GABBR1Q9UBS5 961 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 TCEAL9Q9UHQ7 104 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 PCDHA2Q9Y5H9 948 aa14.59□□□□□ -0.07
HDAC1-209ENST00000484305 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 KIF28PB7ZC32 967 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 CHMP2AO43633 222 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 SLC37A4O43826 429 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 TLL1O43897 1013 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 KLRC1P26715 233 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 MRPS6P82932 125 aaKnown RBP14.58□□□□□ -0.08
HDAC1-209ENST00000484305 TMEM62Q0P6H9 643 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 NR5A1Q13285 461 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 LPIN1Q14693 890 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 LETM2Q2VYF4 491 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 PIK3AP1Q6ZUJ8 805 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 CKAP2LQ8IYA6 745 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 MAFAQ8NHW3 353 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-209ENST00000484305 ETNPPLQ8TBG4 499 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 SEPT8Q92599 483 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 ZBED2Q9BTP6 218 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 TEKT3Q9BXF9 490 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 IFIH1Q9BYX4 1025 aaKnown RBP14.58□□□□□ -0.08
HDAC1-209ENST00000484305 DISC1Q9NRI5 854 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
HDAC1-209ENST00000484305 CDY2AQ9Y6F7 541 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.08
HDAC1-209ENST00000484305 SMIM35A0A1B0GVV1 85 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 LCHNA4D1U4 455 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 FAM205CA6NFA0 338 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 GJB5O95377 273 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 GHRP10912 638 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
HDAC1-209ENST00000484305 FOSBP53539 338 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 TAP1Q03518 808 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 ZNF484Q5JVG2 852 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 FBXO47Q5MNV8 452 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 FAM117BQ6P1L5 589 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 NEK8Q86SG6 692 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 CCDC83Q8IWF9 413 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 BBXQ8WY36 941 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-209ENST00000484305 TNFRSF25Q93038 417 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 EYSQ5T1H1 3165 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 IGSF9BQ9UPX0 1349 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 COL1A2P08123 1366 aa14.57□□□□□ -0.08
HDAC1-209ENST00000484305 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-209ENST00000484305 ZNF862O60290 1169 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 MMP1P03956 469 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 AMHP03971 560 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
HDAC1-209ENST00000484305 SFNP31947 248 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 KRT2P35908 639 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 JAK3P52333 1124 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 ADGRE1Q14246 886 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 UGCGQ16739 394 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 IER5Q5VY09 327 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 B3GNT9Q6UX72 402 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 MIER3Q7Z3K6 550 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 SPRED2Q7Z698 418 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 MYOCDQ8IZQ8 938 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 SLC17A8Q8NDX2 589 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 APBB2Q92870 758 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 GAS2L1Q99501 681 aaPredicted RBP14.56□□□□□ -0.08
HDAC1-209ENST00000484305 RAD9AQ99638 391 aa14.56□□□□□ -0.08
HDAC1-209ENST00000484305 CERS4Q9HA82 394 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms