RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 IQCF3P0C7M6 154 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 CKBP12277 381 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 SELPP16109 830 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 MCM7P33993 719 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 TRAF7Q6Q0C0 670 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
COL2A1-206ENST00000483376 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
COL2A1-206ENST00000483376 PCDHA2Q9Y5H9 948 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 ZBTB42B2RXF5 422 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 OATP04181 439 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 CSF2RAP15509 400 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 PRPHP41219 470 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 QARSP47897 775 aaKnown RBP18.29■□□□□ 0.52
COL2A1-206ENST00000483376 PSMC5P62195 406 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 XKR3Q5GH77 459 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 FAM26DQ5JW98 314 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
COL2A1-206ENST00000483376 LRRC8DQ7L1W4 858 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
COL2A1-206ENST00000483376 TDHQ8IZJ6 230 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 WNT8BQ93098 351 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 IL23AQ9NPF7 189 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 NRBP2Q9NSY0 501 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 PPME1Q9Y570 386 aa18.29■□□□□ 0.52
COL2A1-206ENST00000483376 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 STBD1O95210 358 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 CXCL10P02778 98 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 CCL23P55773 120 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 PRKCEQ02156 737 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 ZNF174Q15697 407 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 UGCGQ16739 394 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 CKAP2LQ8IYA6 745 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 VWCEQ96DN2 955 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 HSD17B14Q9BPX1 270 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 NIFKQ9BYG3 293 aaKnown RBP18.28■□□□□ 0.52
COL2A1-206ENST00000483376 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
COL2A1-206ENST00000483376 MYH9P35579 1960 aaKnown RBP18.28■□□□□ 0.52
COL2A1-206ENST00000483376 TRIP12Q14669 1992 aaPredicted RBP18.28■□□□□ 0.52
COL2A1-206ENST00000483376 TRIOBPQ9H2D6 2365 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 MAGEB2O15479 319 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 LYPLA2O95372 231 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 ATP2B1P20020 1258 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 TXKP42681 527 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL2A1-206ENST00000483376 EPHB4P54760 987 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 TARBP2Q15633 366 aaKnown RBP18.27■□□□□ 0.52
COL2A1-206ENST00000483376 MTHFD1LQ6UB35 978 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 RSPH3Q86UC2 560 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 NME8Q8N427 588 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
COL2A1-206ENST00000483376 WDR81Q562E7 1941 aa18.27■□□□□ 0.51
COL2A1-206ENST00000483376 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-206ENST00000483376 STX6O43752 255 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 BMP15O95972 392 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 THPOP40225 353 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 ATP2C1P98194 919 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-206ENST00000483376 PTGDRQ13258 359 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 PDIA5Q14554 519 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 LRIT3Q3SXY7 679 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 TMEM240Q5SV17 173 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 ZNF618Q5T7W0 954 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 RASIP1Q5U651 963 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 FAM43BQ6ZT52 329 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-206ENST00000483376 C16orf59Q7L2K0 433 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 ZNF710Q8N1W2 664 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 SCLYQ96I15 445 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-206ENST00000483376 ZSWIM4Q9H7M6 989 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
COL2A1-206ENST00000483376 RSPH10B2B2RC85 870 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 SLITRK3O94933 977 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 C22orf31O95567 290 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 RSPH10BP0C881 870 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 MUTP22033 750 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 KLRC1P26715 233 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 MGAT3Q09327 533 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 RESTQ13127 1097 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 NBR1Q14596 966 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 GPNMBQ14956 572 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 TMEM266Q2M3C6 531 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
COL2A1-206ENST00000483376 ARL6IP4Q66PJ3 421 aaKnown RBP18.25■□□□□ 0.51
COL2A1-206ENST00000483376 RUFY4Q6ZNE9 571 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 LINC01465Q8N7H1 131 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 IGSF22Q8N9C0 903 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 EIF2AK1Q9BQI3 630 aaKnown RBP18.25■□□□□ 0.51
COL2A1-206ENST00000483376 LXNQ9BS40 222 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 RAB34Q9BZG1 259 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 SQORQ9Y6N5 450 aa18.25■□□□□ 0.51
COL2A1-206ENST00000483376 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
COL2A1-206ENST00000483376 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
COL2A1-206ENST00000483376 KDM3AQ9Y4C1 1321 aa18.24■□□□□ 0.51
COL2A1-206ENST00000483376 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
COL2A1-206ENST00000483376 IGBP1P78318 339 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms