RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 MSH2P43246 934 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 TUBP50607 506 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 EVX2Q03828 476 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 FMO2Q99518 471 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 STXBP3O00186 592 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 OAS1P00973 400 aaKnown RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 FGFR2P21802 821 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 PRPHP41219 470 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
VTI1A-205ENST00000483122 COPS2P61201 443 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 KLHL30Q0D2K2 578 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 COBLL1Q53SF7 1204 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 GLIS3Q8NEA6 775 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 PIDD1Q9HB75 910 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 ARHGEF3Q9NR81 526 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 ANAPC4Q9UJX5 808 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
VTI1A-205ENST00000483122 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 CCDC188H7C350 402 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 CCNG1P51959 295 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 BNIP1Q12981 228 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 LRRC41Q15345 812 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 ANO7Q6IWH7 933 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 UHMK1Q8TAS1 419 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 SYN2Q92777 582 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 TSC22D3Q99576 134 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 PAPOLBQ9NRJ5 636 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 NKX1-2Q9UD57 310 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 UTP11Q9Y3A2 253 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 NR2E1Q9Y466 385 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 BCL9O00512 1426 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
VTI1A-205ENST00000483122 ABCB11O95342 1321 aa12.85□□□□□ -0.35
VTI1A-205ENST00000483122 FERP16591 822 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 CYP7A1P22680 504 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 CALML3P27482 149 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 ZNF131P52739 623 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 CTSWP56202 376 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 SLITRK6Q9H5Y7 841 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 PCDHA6Q9UN73 950 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 PCDHA8Q9Y5H6 950 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 M0R2N6 131 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 SMIM24O75264 130 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 TRIM28Q13263 835 aaKnown RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 RASGEF1CQ8N431 466 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 PGM2Q96G03 612 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 BORCS6Q96GS4 357 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 ZMYND12Q9H0C1 365 aa12.84□□□□□ -0.35
VTI1A-205ENST00000483122 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-205ENST00000483122 MYMKA6NI61 221 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 HGSO14964 777 aaPredicted RBP12.83□□□□□ -0.35
VTI1A-205ENST00000483122 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.35
VTI1A-205ENST00000483122 NUDT17P0C025 328 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 COPB2P35606 906 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 PMS2P54278 862 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 PLS1Q14651 629 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 SEPT2Q15019 361 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 CNGA2Q16280 664 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 ASIC2Q16515 512 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 CCDC38Q502W7 563 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 ARMC3Q5W041 872 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 ITFG2Q969R8 447 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 NUCKS1Q9H1E3 243 aaKnown RBP12.83□□□□□ -0.35
VTI1A-205ENST00000483122 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 FGFR1OP2Q9NVK5 253 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.35
VTI1A-205ENST00000483122 ITGB4P16144 1822 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms