RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SCLYQ96I15 445 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 FAM167AQ96KS9 214 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 TUBE1Q9UJT0 475 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
SNX4-205ENST00000482965 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
SNX4-205ENST00000482965 A0A1W2PPC1 479 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 IQCF3P0C7M6 154 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 ACRP10323 421 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 CKBP12277 381 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 SELPP16109 830 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 RFC2P35250 354 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 THPOP40225 353 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 EPHB4P54760 987 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 ADAM17P78536 824 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 RBL2Q08999 1139 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 ORC2Q13416 577 aaPredicted RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 TRIM71Q2Q1W2 868 aaKnown RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 HABP4Q5JVS0 413 aaKnown RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 NCAPH2Q6IBW4 605 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 B3GNT9Q6UX72 402 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 LRRC8DQ7L1W4 858 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 TRAPPC12Q8WVT3 735 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
SNX4-205ENST00000482965 WNT8BQ93098 351 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 IL23AQ9NPF7 189 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 PCDHA12Q9UN75 941 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 LOXHD1Q8IVV2 1947 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 COL1A2P08123 1366 aa9.87□□□□□ -0.83
SNX4-205ENST00000482965 MBLAC1A4D2B0 266 aaPredicted RBP9.86□□□□□ -0.83
SNX4-205ENST00000482965 EML1O00423 815 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 ZNF862O60290 1169 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 OATP04181 439 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 OR52Z1P0C646 297 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 ATP4AP20648 1035 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 TXKP42681 527 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 PRKCEQ02156 737 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 NBR1Q14596 966 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 EPHA7Q15375 998 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 SHHQ15465 462 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 UGCGQ16739 394 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 ZNF484Q5JVG2 852 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 C9orf50Q5SZB4 431 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 ZNF618Q5T7W0 954 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 TAF2Q6P1X5 1199 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 PSRC1Q6PGN9 363 aaPredicted RBP9.86□□□□□ -0.83
SNX4-205ENST00000482965 RUFY4Q6ZNE9 571 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 DEFB128Q7Z7B8 93 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 RNPC3Q96LT9 517 aaKnown RBP9.86□□□□□ -0.83
SNX4-205ENST00000482965 MTMR9Q96QG7 549 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.86□□□□□ -0.83
SNX4-205ENST00000482965 TMEM60Q9H2L4 133 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 TTC12Q9H892 705 aaPredicted RBP9.86□□□□□ -0.83
SNX4-205ENST00000482965 NRBP2Q9NSY0 501 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
SNX4-205ENST00000482965 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 DKC1O60832 514 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNX4-205ENST00000482965 CAND2O75155 1236 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 PARNO95453 639 aaKnown RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 FGBP02675 491 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 RPLP2P05387 115 aaKnown RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 P4HBP07237 508 aaKnown RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 PFKMP08237 780 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 CTSHP09668 335 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 KLRC1P26715 233 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 QARSP47897 775 aaKnown RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 TOB1P50616 345 aaPredicted RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 PSMC5P62195 406 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 SPIRE1Q08AE8 756 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 RILPL1Q5EBL4 403 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 TMEM240Q5SV17 173 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 MTHFD1LQ6UB35 978 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 ZNF365Q70YC5 407 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 DNAJB3Q8WWF6 145 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 FTOQ9C0B1 505 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNX4-205ENST00000482965 FAM49AQ9H0Q0 323 aaPredicted RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 MTIF3Q9H2K0 278 aaKnown RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 SEPT9Q9UHD8 586 aaPredicted RBP9.85□□□□□ -0.83
SNX4-205ENST00000482965 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 PCDHA2Q9Y5H9 948 aa9.85□□□□□ -0.83
SNX4-205ENST00000482965 SIP14410 1827 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 SMIM35A0A1B0GVV1 85 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 POTEMA6NI47 508 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 ACTN1P12814 892 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 SYT1P21579 422 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 CYP4A11Q02928 519 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 PTGDRQ13258 359 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 TMEM266Q2M3C6 531 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 XKR3Q5GH77 459 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
SNX4-205ENST00000482965 BRAPQ7Z569 592 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms