RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PKD2L1Q9P0L9 805 aa14.6□□□□□ -0.07
COL21A1-209ENST00000482933 TELO2Q9Y4R8 837 aa14.6□□□□□ -0.07
COL21A1-209ENST00000482933 MYO9BQ13459 2157 aa14.6□□□□□ -0.07
COL21A1-209ENST00000482933 KAT6AQ92794 2004 aa14.6□□□□□ -0.07
COL21A1-209ENST00000482933 EYSQ5T1H1 3165 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 NID2Q14112 1375 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 NFASCO94856 1347 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 GSTTP1A0A1W2PQM5 241 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 SCG2P13521 617 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 CLK2P49760 499 aaKnown RBP14.59□□□□□ -0.07
COL21A1-209ENST00000482933 ADAM17P78536 824 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
COL21A1-209ENST00000482933 ADGRE1Q14246 886 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 CEP55Q53EZ4 464 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 MCTP2Q6DN12 878 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 PGBD1Q96JS3 809 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 SDF4Q9BRK5 362 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 UNC80Q8N2C7 3258 aa14.59□□□□□ -0.07
COL21A1-209ENST00000482933 ESYT2A0FGR8 921 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.07
COL21A1-209ENST00000482933 GNA11P29992 359 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 ZNF76P36508 570 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 SREBF1P36956 1147 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 MBTPS1Q14703 1052 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 TAF2Q6P1X5 1199 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 USP38Q8NB14 1042 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 DBF4BQ8NFT6 615 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 LMBR1Q8WVP7 490 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 PPM1EQ8WY54 764 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 AZI2Q9H6S1 392 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 C6orf50Q9HD87 102 aa14.58□□□□□ -0.07
COL21A1-209ENST00000482933 GJB5O95377 273 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 CTSHP09668 335 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 DEFB103AP81534 67 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 TAP1Q03518 808 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 PPFIA1Q13136 1202 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 PLEKHG4Q58EX7 1191 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 RUFY3Q7L099 469 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 NIPA1Q7RTP0 329 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 RPAINQ86UA6 219 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 RSPH3Q86UC2 560 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 CYP2W1Q8TAV3 490 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 SEPT8Q92599 483 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 APBB2Q92870 758 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 RAD9AQ99638 391 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 COL25A1Q9BXS0 654 aaPredicted RBP14.58□□□□□ -0.08
COL21A1-209ENST00000482933 ZMYND12Q9H0C1 365 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 TMEM260Q9NX78 707 aa14.58□□□□□ -0.08
COL21A1-209ENST00000482933 PTPRSQ13332 1948 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 MEIS1O00470 390 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 AMHP03971 560 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 RPLP2P05387 115 aaKnown RBP14.57□□□□□ -0.08
COL21A1-209ENST00000482933 ARP10275 920 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 MARK3P27448 753 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 EVCP57679 992 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 GRIK4Q16099 956 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 TCTN1Q2MV58 587 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 FAM26DQ5JW98 314 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 JAKMIP3Q5VZ66 844 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 CCDC148Q8NFR7 591 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 BICD2Q8TD16 824 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 ARNTL2Q8WYA1 636 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 SYMPKQ92797 1274 aaKnown RBP14.57□□□□□ -0.08
COL21A1-209ENST00000482933 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
COL21A1-209ENST00000482933 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
COL21A1-209ENST00000482933 AGO4Q9HCK5 861 aaKnown RBP14.57□□□□□ -0.08
COL21A1-209ENST00000482933 RRN3P2A6NIE6 340 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 RNF40O75150 1001 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 CYP3A4P08684 503 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 POU3F3P20264 500 aaPredicted RBP14.56□□□□□ -0.08
COL21A1-209ENST00000482933 ACTR2P61160 394 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 PTGDRQ13258 359 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 CCDC85BQ15834 202 aaPredicted RBP14.56□□□□□ -0.08
COL21A1-209ENST00000482933 PKN1Q16512 942 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 PLPPR4Q7Z2D5 763 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 MYOCDQ8IZQ8 938 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
COL21A1-209ENST00000482933 PHKBQ93100 1093 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 TUBE1Q9UJT0 475 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 INSL6Q9Y581 213 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 CYP46A1Q9Y6A2 500 aa14.56□□□□□ -0.08
COL21A1-209ENST00000482933 MBLAC1A4D2B0 266 aaPredicted RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 IFNAR1P17181 557 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 PDIA3P30101 505 aaKnown RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 STAT5BP51692 787 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 CCT2P78371 535 aaKnown RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 SETQ01105 290 aaPredicted RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 NTRK3Q16288 839 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 TMCO2Q7Z6W1 182 aaPredicted RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 PLA2G4DQ86XP0 818 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
COL21A1-209ENST00000482933 SLC26A6Q9BXS9 759 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 TM6SF1Q9BZW5 370 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 THEGQ9P2T0 379 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 MICAL3Q7RTP6 2002 aa14.55□□□□□ -0.08
COL21A1-209ENST00000482933 A0A0C4DFX4 3053 aa14.54□□□□□ -0.08
COL21A1-209ENST00000482933 RFXAPO00287 272 aa14.54□□□□□ -0.08
COL21A1-209ENST00000482933 ARHGEF15O94989 841 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms