RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PLPPR4Q7Z2D5 763 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 APBB2Q92870 758 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 LENG9Q96B70 501 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-212ENST00000482251 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
CPSF4-212ENST00000482251 C17orf80Q9BSJ5 609 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 GINS2Q9Y248 185 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 XIRP2A4UGR9 3374 aa11.88□□□□□ -0.51
CPSF4-212ENST00000482251 SPTBN5Q9NRC6 3674 aaKnown RBP11.87□□□□□ -0.51
CPSF4-212ENST00000482251 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 M0QZ92 97 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 LPXNO60711 386 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 ATG7O95352 703 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 DEXIO95424 95 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 TDP2O95551 362 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 TFF2Q03403 129 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
CPSF4-212ENST00000482251 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 TBCKQ8TEA7 893 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 ATP8B4Q8TF62 1192 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 AGO3Q9H9G7 860 aaKnown RBP11.87□□□□□ -0.51
CPSF4-212ENST00000482251 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 GABBR1Q9UBS5 961 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 PCDHA4Q9UN74 947 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 INSL6Q9Y581 213 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 TRPV2Q9Y5S1 764 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 LOXHD1Q8IVV2 1947 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
CPSF4-212ENST00000482251 MSH4O15457 936 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 EDIL3O43854 480 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 CSPG5O95196 566 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 LARGE1O95461 756 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-212ENST00000482251 ATP4AP20648 1035 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 KLRC1P26715 233 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 CIITAP33076 1130 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 AK2P54819 239 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TMEM266Q2M3C6 531 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TJAP1Q5JTD0 557 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 BLIDQ8IZY5 108 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 LINC01599Q8WXQ3 324 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TOP1MTQ969P6 601 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-212ENST00000482251 SH3GLB2Q9NR46 395 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TBC1D22BQ9NU19 505 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 TRANK1O15050 2925 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
CPSF4-212ENST00000482251 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 HBP1O60381 514 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 GAS7O60861 476 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 PSAPP07602 524 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 SLC26A2P50443 739 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 FOSBP53539 338 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 ERVK-21P61565 698 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 KRT76Q01546 638 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 PAK2Q13177 524 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 NPY5RQ15761 445 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 UGCGQ16739 394 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 INF2Q27J81 1249 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 LRCH2Q5VUJ6 765 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 IER5Q5VY09 327 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 SMAP1Q8IYB5 467 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-212ENST00000482251 NECAB1Q8N987 351 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-212ENST00000482251 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
CPSF4-212ENST00000482251 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
CPSF4-212ENST00000482251 MYH9P35579 1960 aaKnown RBP11.85□□□□□ -0.51
CPSF4-212ENST00000482251 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 WDR81Q562E7 1941 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 COL1A2P08123 1366 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 CDKL5O76039 1030 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 C22orf31O95567 290 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 VTNP04004 478 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 KCNQ1P51787 676 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 CLCN3P51790 818 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
CPSF4-212ENST00000482251 PRKCEQ02156 737 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 DAGLBQ8NCG7 672 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 TMEM40Q8WWA1 233 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 ATXN2LQ8WWM7 1075 aaKnown RBP11.84□□□□□ -0.51
CPSF4-212ENST00000482251 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
CPSF4-212ENST00000482251 ASB2Q96Q27 587 aa11.84□□□□□ -0.51
CPSF4-212ENST00000482251 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms