RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 FAM49AQ9H0Q0 323 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-213ENST00000482192 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 GJB4Q9NTQ9 266 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 DDX25Q9UHL0 483 aaKnown RBP13.44□□□□□ -0.26
HMGN1-213ENST00000482192 PCDHA2Q9Y5H9 948 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-213ENST00000482192 M0QZ92 97 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 TLL1O43897 1013 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 AMHP03971 560 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 CA3P07451 260 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 MYOGP15173 224 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 GCFC2P16383 781 aaKnown RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 KRT2P35908 639 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 JAK3P52333 1124 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 DEFB103AP81534 67 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 MRPS6P82932 125 aaKnown RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 TRIM29Q14134 588 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 IER5Q5VY09 327 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 FAM167AQ96KS9 214 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 KIF2CQ99661 725 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 NAP1L4Q99733 375 aaKnown RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
HMGN1-213ENST00000482192 DISC1Q9NRI5 854 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 GABBR1Q9UBS5 961 aa13.43□□□□□ -0.26
HMGN1-213ENST00000482192 IGSF9BQ9UPX0 1349 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 TRIP12Q14669 1992 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-213ENST00000482192 SMIM35A0A1B0GVV1 85 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 CHMP2AO43633 222 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 JAK2O60674 1132 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 PSMD10O75832 226 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 GJB5O95377 273 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 ATP4AP20648 1035 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 MGAT3Q09327 533 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-213ENST00000482192 PPP4R3AQ6IN85 833 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 RDM1Q8NG50 284 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 ETNPPLQ8TBG4 499 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-213ENST00000482192 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
HMGN1-213ENST00000482192 UNC45AQ9H3U1 944 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
HMGN1-213ENST00000482192 CEP131Q9UPN4 1083 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
HMGN1-213ENST00000482192 ZBTB42B2RXF5 422 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 SLC37A4O43826 429 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 MMP1P03956 469 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 GHRP10912 638 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 KLRC1P26715 233 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 ST3GAL1Q11201 340 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 LPIN1Q14693 890 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.262e-8■■■□□ 17.8
HMGN1-213ENST00000482192 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-213ENST00000482192 NME8Q8N427 588 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-213ENST00000482192 GJA10Q969M2 543 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-213ENST00000482192 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
HMGN1-213ENST00000482192 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-213ENST00000482192 GBF1Q92538 1859 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TBX3O15119 743 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
HMGN1-213ENST00000482192 C22orf31O95567 290 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 OATP04181 439 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 PRKCEQ02156 737 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TAP1Q03518 808 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TMEM62Q0P6H9 643 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 NR5A1Q13285 461 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 RABEP1Q15276 862 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 KRT40Q6A162 431 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 B3GNT9Q6UX72 402 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
HMGN1-213ENST00000482192 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 CCDC83Q8IWF9 413 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 MYOCDQ8IZQ8 938 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 RAD9AQ99638 391 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
HMGN1-213ENST00000482192 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 NRBP2Q9NSY0 501 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
HMGN1-213ENST00000482192 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
HMGN1-213ENST00000482192 UGCGQ16739 394 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms