RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 CDX2Q99626 313 aaPredicted RBP16.75■□□□□ 0.27
OPTN-210ENST00000482140 FAM49AQ9H0Q0 323 aaPredicted RBP16.75■□□□□ 0.27
OPTN-210ENST00000482140 GABBR1Q9UBS5 961 aa16.75■□□□□ 0.27
OPTN-210ENST00000482140 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
OPTN-210ENST00000482140 YBX2Q9Y2T7 364 aaKnown RBP16.75■□□□□ 0.27
OPTN-210ENST00000482140 LAMA2P24043 3122 aaKnown RBP16.75■□□□□ 0.27
OPTN-210ENST00000482140 MICAL3Q7RTP6 2002 aa16.75■□□□□ 0.27
OPTN-210ENST00000482140 M0QZ92 97 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
OPTN-210ENST00000482140 JAK3P52333 1124 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 PLEKHG4Q58EX7 1191 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 FAM26DQ5JW98 314 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 PPP2R2DQ66LE6 453 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
OPTN-210ENST00000482140 HERC6Q8IVU3 1022 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 MYLIPQ8WY64 445 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 NAP1L4Q99733 375 aaKnown RBP16.74■□□□□ 0.27
OPTN-210ENST00000482140 ZBED2Q9BTP6 218 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 COL1A2P08123 1366 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 PTPRSQ13332 1948 aa16.74■□□□□ 0.27
OPTN-210ENST00000482140 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
OPTN-210ENST00000482140 FOSL2P15408 326 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 GCFC2P16383 781 aaKnown RBP16.73■□□□□ 0.27
OPTN-210ENST00000482140 SFNP31947 248 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 GRIN2CQ14957 1233 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 RABEP1Q15276 862 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 TCTN1Q2MV58 587 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 ZNF484Q5JVG2 852 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 BBXQ8WY36 941 aaPredicted RBP16.73■□□□□ 0.27
OPTN-210ENST00000482140 GJA10Q969M2 543 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 ZBTB10Q96DT7 871 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 FAM167AQ96KS9 214 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 MBOAT7Q96N66 472 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 KIF2CQ99661 725 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 UNC45AQ9H3U1 944 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
OPTN-210ENST00000482140 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 MAFBQ9Y5Q3 323 aaPredicted RBP16.73■□□□□ 0.27
OPTN-210ENST00000482140 CDY2AQ9Y6F7 541 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 EVPLQ92817 2033 aa16.73■□□□□ 0.27
OPTN-210ENST00000482140 TLL1O43897 1013 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 MARCH6O60337 910 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 CHRNA1P02708 482 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 MMP1P03956 469 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 AMHP03971 560 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 GHRP10912 638 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 MYOGP15173 224 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 DEFB103AP81534 67 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 MRPS6P82932 125 aaKnown RBP16.72■□□□□ 0.27
OPTN-210ENST00000482140 ST3GAL1Q11201 340 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 NR5A1Q13285 461 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 IER5Q5VY09 327 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 RDM1Q8NG50 284 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 APBB2Q92870 758 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 GAS2L1Q99501 681 aaPredicted RBP16.72■□□□□ 0.27
OPTN-210ENST00000482140 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
OPTN-210ENST00000482140 IFIH1Q9BYX4 1025 aaKnown RBP16.72■□□□□ 0.27
OPTN-210ENST00000482140 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 SIP14410 1827 aa16.72■□□□□ 0.27
OPTN-210ENST00000482140 IGSF9BQ9UPX0 1349 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 LOXHD1Q8IVV2 1947 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 SMIM35A0A1B0GVV1 85 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 SLC37A4O43826 429 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 ST18O60284 1047 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 PSMD10O75832 226 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 CA3P07451 260 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 KLRC1P26715 233 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 MGAT3Q09327 533 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
OPTN-210ENST00000482140 KRT40Q6A162 431 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 TRPV2Q9Y5S1 764 aa16.71■□□□□ 0.27
OPTN-210ENST00000482140 ATP4AP20648 1035 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
OPTN-210ENST00000482140 PRKCEQ02156 737 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 TMEM62Q0P6H9 643 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
OPTN-210ENST00000482140 MYOCDQ8IZQ8 938 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 NME8Q8N427 588 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 FAM184AQ8NB25 1140 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 FAM20AQ96MK3 541 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 OSBPL7Q9BZF2 842 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
OPTN-210ENST00000482140 BTBD18B2RXH4 712 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 GJB5O95377 273 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
OPTN-210ENST00000482140 OATP04181 439 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 LPIN1Q14693 890 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
OPTN-210ENST00000482140 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
OPTN-210ENST00000482140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms