RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ARHGAP28	Q9P2N2	729 aa		5.22	□□□□□ -1.57
CCNL1-223	ENST00000481173	TCRBV5S4A2T	A0A5A2	114 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	ADH4	P08319	380 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	PDE6A	P16499	860 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	HIBADH	P31937	336 aa	Known RBP	5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	ETV4	P43268	484 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	GPR85	P60893	370 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	BTBD8	Q5XKL5	378 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	DPP8	Q6V1X1	898 aa	Predicted RBP	5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	DNAJC10	Q8IXB1	793 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	CFHR4	Q92496	578 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	SCYL1	Q96KG9	808 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	IGSF5	Q9NSI5	407 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	RIC8B	Q9NVN3	520 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	PUF60	Q9UHX1	559 aa	Known RBP	5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	CDC42EP3	Q9UKI2	254 aa		5.21	□□□□□ -1.58
CCNL1-223	ENST00000481173	FAM90A27P	A6NNH2	459 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	FAM47E-STBD1	D6RA91	191 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173		E9PSI1	815 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	HMGCR	P04035	888 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	RPS19	P39019	145 aa	Known RBP	5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	IL13RA1	P78552	427 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	NFYC	Q13952	458 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	ZNF627	Q7L945	461 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	IFNL3	Q8IZI9	196 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	ZNF483	Q8TF39	744 aa	Predicted RBP	5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	ZG16B	Q96DA0	208 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	AARSD1	Q9BTE6	412 aa	Known RBP	5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	ZDHHC5	Q9C0B5	715 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	PLA2G3	Q9NZ20	509 aa		5.2	□□□□□ -1.58
CCNL1-223	ENST00000481173	PTPN1	P18031	435 aa	Known RBP	5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	STYK1	Q6J9G0	422 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	OSBP2	Q969R2	916 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	TMEM176A	Q96HP8	235 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	ZFYVE21	Q9BQ24	234 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	ARHGEF4	Q9NR80	690 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	REXO2	Q9Y3B8	237 aa	Known RBP	5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	ASXL2	Q76L83	1435 aa		5.19	□□□□□ -1.58
CCNL1-223	ENST00000481173	PABPC1	P11940	636 aa	Known RBP	5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	MAK	P20794	623 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	MC4R	P32245	332 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	RAB33A	Q14088	237 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	PCOLCE	Q15113	449 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	NSMF	Q6X4W1	530 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	USP30	Q70CQ3	517 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	FILIP1	Q7Z7B0	1213 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	SGMS1	Q86VZ5	419 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	GPR135	Q8IZ08	494 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	OR14K1	Q8NGZ2	314 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	CLIP3	Q96DZ5	547 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	AGAP2	Q99490	1192 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	ALG1	Q9BT22	464 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	SLC2A4RG	Q9NR83	387 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	PODXL2	Q9NZ53	605 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	HECA	Q9UBI9	543 aa	Predicted RBP	5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	SRPK3	Q9UPE1	567 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	TRAF6	Q9Y4K3	522 aa		5.18	□□□□□ -1.58
CCNL1-223	ENST00000481173	FGFR1	P11362	822 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	PTGS1	P23219	599 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	NAALADL2	Q58DX5	795 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	ARHGAP36	Q6ZRI8	547 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	OTOP2	Q7RTS6	562 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	MRGPRG	Q86SM5	289 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	SGSM3	Q96HU1	749 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	CRAMP1	Q96RY5	1269 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	TRIM55	Q9BYV6	548 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	INCENP	Q9NQS7	918 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	CEP72	Q9P209	647 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	DMRT1	Q9Y5R6	373 aa		5.17	□□□□□ -1.58
CCNL1-223	ENST00000481173	IQCA1L	A6NCM1	817 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	PPFIA2	O75334	1257 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	STK10	O94804	968 aa	Known RBP	5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	KRT15	P19012	456 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	MRE11	P49959	708 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	HHEX	Q03014	270 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	IFRD2	Q12894	506 aa	Predicted RBP	5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	GRM7	Q14831	915 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	PTRH1	Q86Y79	214 aa	Known RBP	5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	NLGN4X	Q8N0W4	816 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	D2HGDH	Q8N465	521 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	GALNT8	Q9NY28	637 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	GIT1	Q9Y2X7	761 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	ATP23	Q9Y6H3	246 aa		5.16	□□□□□ -1.58
CCNL1-223	ENST00000481173	PRAMEF25	A6NGN4	478 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	CCDC85C	A6NKD9	419 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	CAPN14	A8MX76	684 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	MAN2B1	O00754	1011 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	KCNK3	O14649	394 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	CD83	Q01151	205 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	EIF4H	Q15056	248 aa	Known RBP	5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	GPR19	Q15760	415 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	PCSK4	Q6UW60	755 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	LRSAM1	Q6UWE0	723 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	SPATC1	Q76KD6	591 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	RTKN2	Q8IZC4	609 aa		5.15	□□□□□ -1.59
CCNL1-223	ENST00000481173	OR10A2	Q9H208	303 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms