RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 CKMT1AP12532 417 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 MX2P20592 715 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 GBP1P32455 592 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 AGFG1P52594 562 aaKnown RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 KIF23Q02241 960 aaPredicted RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 CREB3L3Q68CJ9 461 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 OTUD6BQ8N6M0 293 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 LRFN3Q9BTN0 628 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 NKX2-4Q9H2Z4 354 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 MBIPQ9NS73 344 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 MASP2O00187 686 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 FGF18O76093 207 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 PARP1P09874 1014 aaKnown RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 ESRRAP11474 423 aaPredicted RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 ITGA4P13612 1032 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 AGXTP21549 392 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 MAN2A2P49641 1150 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 DRG2P55039 364 aaKnown RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 ANKRD39Q53RE8 183 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 PLBD1Q6P4A8 553 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 LRRTM4Q86VH4 590 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 MSANTD4Q8NCY6 345 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 SNX21Q969T3 373 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 TIGD1Q96MW7 591 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 MKRN2Q9H000 416 aaKnown RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 JMJD4Q9H9V9 463 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 DCP1AQ9NPI6 582 aaPredicted RBP9.24□□□□□ -0.93
LSM5-210ENST00000480956 SERPINB13Q9UIV8 391 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 ZNF112Q9UJU3 913 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
LSM5-210ENST00000480956 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
LSM5-210ENST00000480956 ALDH2P05091 517 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SCG5P05408 212 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 MUTP22033 750 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 KIF5BP33176 963 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 LSP1P33241 339 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 TUBP50607 506 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SIK1P57059 783 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 ALDH6A1Q02252 535 aaKnown RBP9.23□□□□□ -0.93
LSM5-210ENST00000480956 NUGGCQ68CJ6 796 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 CPLX2Q6PUV4 134 aaKnown RBP9.23□□□□□ -0.93
LSM5-210ENST00000480956 GALNT13Q8IUC8 556 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 BRI3BPQ8WY22 251 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 ZFYVE21Q9BQ24 234 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SORBS1Q9BX66 1292 aaKnown RBP9.23□□□□□ -0.93
LSM5-210ENST00000480956 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 CEP72Q9P209 647 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 LRFN1Q9P244 771 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SEL1LQ9UBV2 794 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 SIK3Q9Y2K2 1263 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 GPR45Q9Y5Y3 372 aa9.23□□□□□ -0.93
LSM5-210ENST00000480956 POM121BA6NF01 834 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 NDUFS2O75306 463 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 PEX19P40855 299 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ETF1P62495 437 aaKnown RBP9.22□□□□□ -0.93
LSM5-210ENST00000480956 PHC1P78364 1004 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ZNF543Q08ER8 600 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 GALNT1Q10472 559 aaPredicted RBP9.22□□□□□ -0.93
LSM5-210ENST00000480956 CEP135Q66GS9 1140 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ERC1Q8IUD2 1116 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 PRR18Q8N4B5 295 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 TEX9Q8N6V9 391 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ATG16L2Q8NAA4 619 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ANKRD52Q8NB46 1076 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.22□□□□□ -0.93
LSM5-210ENST00000480956 TSPY26PQ9H489 355 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 POLMQ9NP87 494 aaPredicted RBP9.22□□□□□ -0.93
LSM5-210ENST00000480956 GPRASP1Q5JY77 1395 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 J3QW42 95 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
LSM5-210ENST00000480956 SPINT1O43278 529 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 APOA4P06727 396 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 THP07101 528 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 MYF5P13349 255 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 FOSL1P15407 271 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 MAEAQ7L5Y9 396 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 LIX1LQ8IVB5 337 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 MCATQ8IVS2 390 aaKnown RBP9.22□□□□□ -0.93
LSM5-210ENST00000480956 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
LSM5-210ENST00000480956 GALNT15Q8N3T1 639 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 SSH3Q8TE77 659 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 CCDC74BQ96LY2 380 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 ORAI2Q96SN7 254 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 PHF20Q9BVI0 1012 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 DACT1Q9NYF0 836 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 STAP2Q9UGK3 403 aa9.22□□□□□ -0.93
LSM5-210ENST00000480956 CEP83Q9Y592 693 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms