RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
TRA2B-212ENST00000480461 PRPHP41219 470 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 PSEN2P49810 448 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRA2B-212ENST00000480461 STAT5BP51692 787 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 NUCB2P80303 420 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 FPGSQ05932 587 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 PDIA5Q14554 519 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 EPHA7Q15375 998 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 NCAPH2Q6IBW4 605 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 MIS18BP1Q6P0N0 1132 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 MIER3Q7Z3K6 550 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 SMAP1Q8IYB5 467 aaPredicted RBP13.76□□□□□ -0.21
TRA2B-212ENST00000480461 IGSF22Q8N9C0 903 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 TIFAQ96CG3 184 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
TRA2B-212ENST00000480461 GABBR1Q9UBS5 961 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 FBXO2Q9UK22 296 aaPredicted RBP13.76□□□□□ -0.21
TRA2B-212ENST00000480461 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
TRA2B-212ENST00000480461 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 LAD1O00515 517 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 PSAPP07602 524 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 RAG1P15918 1043 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 MARK3P27448 753 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 SFNP31947 248 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 CHMP4BP1P59074 171 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF200P98182 395 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 MFSD10Q14728 455 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 ECM1Q16610 540 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 KIAA0753Q2KHM9 967 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 DTHD1Q6ZMT9 781 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 PLPPR4Q7Z2D5 763 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 BANK1Q8NDB2 785 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 PPM1EQ8WY54 764 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 DYDC2Q96IM9 177 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 GLT1D1Q96MS3 346 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 CTAGE1Q96RT6 745 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-212ENST00000480461 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 NCOR1O75376 2440 aa13.75□□□□□ -0.21
TRA2B-212ENST00000480461 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 TMEM150BA6NC51 233 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 VWA3AA6NCI4 1184 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 ZBTB42B2RXF5 422 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 BACH1O14867 736 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
TRA2B-212ENST00000480461 MED24O75448 989 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 CABYRO75952 493 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 JAK3P52333 1124 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
TRA2B-212ENST00000480461 SPECC1Q5M775 1068 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 CATSPER3Q86XQ3 398 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
TRA2B-212ENST00000480461 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 GLG1Q92896 1179 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 ZBTB10Q96DT7 871 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 GAS2L1Q99501 681 aaPredicted RBP13.74□□□□□ -0.21
TRA2B-212ENST00000480461 STARD7Q9NQZ5 370 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 ZNF302Q9NR11 478 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 CHMP5Q9NZZ3 219 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
TRA2B-212ENST00000480461 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
TRA2B-212ENST00000480461 ARVCFO00192 962 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 HOXC8P31273 242 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 ADAM17P78536 824 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 MARCH8Q5T0T0 291 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 AXDND1Q5T1B0 1012 aaPredicted RBP13.73□□□□□ -0.21
TRA2B-212ENST00000480461 ATL3Q6DD88 541 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 PDXDC2PQ6P474 469 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 TRMT1LQ7Z2T5 733 aaKnown RBP13.73□□□□□ -0.21
TRA2B-212ENST00000480461 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 TRPV6Q9H1D0 765 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
TRA2B-212ENST00000480461 MORC2Q9Y6X9 1032 aaPredicted RBP13.73□□□□□ -0.21
TRA2B-212ENST00000480461 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
TRA2B-212ENST00000480461 SPTLC2O15270 562 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 YEATS4O95619 227 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 BMP15O95972 392 aa13.72□□□□□ -0.21
TRA2B-212ENST00000480461 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms