RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 PIK3CDO00329 1044 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 AKAP3O75969 853 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 GCNT3O95395 438 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 CYP3A4P08684 503 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 TAF3Q5VWG9 929 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 SELENOOQ9BVL4 669 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 ARHGEF10LQ9HCE6 1279 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 DMGDHQ9UI17 866 aaKnown RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 A0A087X0T9 212 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 CLIC2O15247 247 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 FAM228BP0C875 321 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 CASP4P49662 377 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 DCAF17Q5H9S7 520 aaPredicted RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 ARHGAP27Q6ZUM4 889 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 TPH2Q8IWU9 490 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 MMGT1Q8N4V1 131 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 MS4A14Q96JA4 679 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 VIPAS39Q9H9C1 493 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 CALCOCO1Q9P1Z2 691 aa18.81■□□□□ 0.6
PKD1-213ENST00000480227 ARMCX3Q9UH62 379 aaPredicted RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 HERC5Q9UII4 1024 aaKnown RBP18.81■□□□□ 0.6
PKD1-213ENST00000480227 ASTN1O14525 1302 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 KLRC1P26715 233 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 MIGA2Q7L4E1 593 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 OTOP1Q7RTM1 612 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 RIN2Q8WYP3 895 aaPredicted RBP18.8■□□□□ 0.6
PKD1-213ENST00000480227 POLR3CQ9BUI4 534 aaPredicted RBP18.8■□□□□ 0.6
PKD1-213ENST00000480227 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 ZBTB21Q9ULJ3 1066 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 TMX2Q9Y320 296 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 PSME4Q14997 1843 aa18.8■□□□□ 0.6
PKD1-213ENST00000480227 TBCAO75347 108 aaKnown RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 PALMO75781 387 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 EYA4O95677 639 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 FTCDO95954 541 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 LRCH2Q5VUJ6 765 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 RINT1Q6NUQ1 792 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 RNF10Q8N5U6 811 aaKnown RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 DYDC2Q96IM9 177 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 VEZTQ9HBM0 779 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 MED4Q9NPJ6 270 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 MYH11P35749 1972 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 SLITRK3O94933 977 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 PAFAH1B1P43034 410 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 ASIC2Q16515 512 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 KIAA0753Q2KHM9 967 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 TCERG1LQ5VWI1 586 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 HSD17B14Q9BPX1 270 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
PKD1-213ENST00000480227 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 PSD3Q9NYI0 1048 aa18.79■□□□□ 0.6
PKD1-213ENST00000480227 COL2A1P02458 1487 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 PDXKO00764 312 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 RNF40O75150 1001 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 NR3C1P04150 777 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 CAPN2P17655 700 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 DPY19L2P1Q6NXN4 242 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 RSBN1LQ6PCB5 846 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 FRMD5Q7Z6J6 570 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 DNAAF5Q86Y56 855 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 TMEM39BQ9GZU3 492 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 FAM204AQ9H8W3 233 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 GOPCQ9HD26 462 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 CNTNAP1P78357 1384 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 CALUO43852 315 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 AFPP02771 609 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 XRCC5P13010 732 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 ZSCAN26Q16670 478 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 ZC2HC1CQ53FD0 456 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 ZNF572Q7Z3I7 529 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 KSR1Q8IVT5 923 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 LUC7LQ9NQ29 371 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 RBM12Q9NTZ6 932 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 TYW1Q9NV66 732 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 AIPL1Q9NZN9 384 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 PACSIN2Q9UNF0 486 aaPredicted RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 SCAF8Q9UPN6 1271 aaKnown RBP18.78■□□□□ 0.6
PKD1-213ENST00000480227 PCDHB13Q9Y5F0 798 aa18.78■□□□□ 0.6
PKD1-213ENST00000480227 GCOM1H8Y6P7 765 aaPredicted RBP18.77■□□□□ 0.6
PKD1-213ENST00000480227 PSMD10O75832 226 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 POLR2MP0CAP2 368 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 UCHL3P15374 230 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 GGCXP38435 758 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 ITIH3Q06033 890 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 DLGAP5Q15398 846 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 NAB2Q15742 525 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 SPAG5Q96R06 1193 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 WRAP73Q9P2S5 460 aaPredicted RBP18.77■□□□□ 0.6
PKD1-213ENST00000480227 KIF13BQ9NQT8 1826 aa18.77■□□□□ 0.6
PKD1-213ENST00000480227 COL4A5P29400 1685 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms