RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 KDF1Q8NAX2 398 aaPredicted RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 PJA1Q8NG27 643 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 ARHGEF3Q9NR81 526 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 SPATA6Q9NWH7 488 aaPredicted RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 IGSF9Q9P2J2 1179 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 PUF60Q9UHX1 559 aaKnown RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 PNMA2Q9UL42 364 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 LAMTOR5O43504 91 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 LILRB5O75023 590 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 UBA1P22314 1058 aaKnown RBP13.95□□□□□ -0.18
USP11-208ENST00000480104 TDO2P48775 406 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 TMC5Q6UXY8 1006 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 RGS22Q8NE09 1264 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 GPR152Q8TDT2 470 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 DDX1Q92499 740 aaKnown RBP13.95□□□□□ -0.18
USP11-208ENST00000480104 GPR20Q99678 358 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
USP11-208ENST00000480104 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 ZSCAN32Q9NX65 697 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 CDY2AQ9Y6F7 541 aa13.95□□□□□ -0.18
USP11-208ENST00000480104 CCDC171Q6TFL3 1326 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 C2orf71A6NGG8 1288 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 TAF4O00268 1085 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 TBC1D4O60343 1298 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 GDF9O60383 454 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 SRFP11831 508 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 PLCB3Q01970 1234 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 SP2Q02086 613 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 SLFN5Q08AF3 891 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
USP11-208ENST00000480104 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 SRRM3A6NNA2 597 aaPredicted RBP13.93□□□□□ -0.18
USP11-208ENST00000480104 NR3C2P08235 984 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 EPCAMP16422 314 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 LAG3P18627 525 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 SMC1AQ14683 1233 aaKnown RBP13.93□□□□□ -0.18
USP11-208ENST00000480104 LPAL2Q16609 132 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 RSPH3Q86UC2 560 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 MRPL43Q8N983 215 aaKnown RBP13.93□□□□□ -0.18
USP11-208ENST00000480104 BOLA2Q9H3K6 86 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 CWH43Q9H720 699 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 IL17RBQ9NRM6 502 aa13.93□□□□□ -0.18
USP11-208ENST00000480104 N4BP1O75113 896 aaKnown RBP13.92□□□□□ -0.18
USP11-208ENST00000480104 TRIM27P14373 513 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 PBX3P40426 434 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 FAM102BQ5T8I3 360 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 ERC1Q8IUD2 1116 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 SLC44A3Q8N4M1 653 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 MLXIPQ9HAP2 919 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
USP11-208ENST00000480104 CYSRT1A8MQ03 144 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 CA8P35219 290 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
USP11-208ENST00000480104 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
USP11-208ENST00000480104 NONOQ15233 471 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP11-208ENST00000480104 DCLRE1AQ6PJP8 1040 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 PRR23CQ6ZRP0 262 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 DNAJB3Q8WWF6 145 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 NELL1Q92832 810 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
USP11-208ENST00000480104 BCO2Q9BYV7 579 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
USP11-208ENST00000480104 LAMA1P25391 3075 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 TSPY2A6NKD2 308 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
USP11-208ENST00000480104 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
USP11-208ENST00000480104 PDE4AP27815 886 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 PAK2Q13177 524 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 IL31Q6EBC2 164 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 KCNV1Q6PIU1 500 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 TSSK4Q6SA08 328 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
USP11-208ENST00000480104 ZNF215Q9UL58 517 aaPredicted RBP13.9□□□□□ -0.18
USP11-208ENST00000480104 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
USP11-208ENST00000480104 LRP3O75074 770 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
USP11-208ENST00000480104 PPM1AP35813 382 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 KRT17Q04695 432 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 LETM2Q2VYF4 491 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 LAIR1Q6GTX8 287 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 CABP7Q86V35 215 aa13.89□□□□□ -0.19
USP11-208ENST00000480104 OSBP2Q969R2 916 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms