RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 MAFBQ9Y5Q3 323 aaPredicted RBP10.79□□□□□ -0.68
CD46-214ENST00000480003 ELP1O95163 1332 aa10.79□□□□□ -0.68
CD46-214ENST00000480003 LRRC37A2A6NM11 1700 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 VWA3AA6NCI4 1184 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 WDR64B1ANS9 1081 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 CUTAO60888 179 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 STBD1O95210 358 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 MMP3P08254 477 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 SUPT20HL2P0C7V6 817 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 ATP4AP20648 1035 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 CDC25AP30304 524 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 GJA8P48165 433 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 JAK3P52333 1124 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 BEX3Q00994 111 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 KCNA10Q16322 511 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 FSCN1Q16658 493 aaKnown RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 TMEM266Q2M3C6 531 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 USP49Q70CQ1 688 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 PLPPR4Q7Z2D5 763 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 MIER3Q7Z3K6 550 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 AFAP1L1Q8TED9 768 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 KAT2BQ92831 832 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 AK8Q96MA6 479 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 POLR3CQ9BUI4 534 aaPredicted RBP10.78□□□□□ -0.68
CD46-214ENST00000480003 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 SPC25Q9HBM1 224 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 XPNPEP3Q9NQH7 507 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 LRWD1Q9UFC0 647 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 TCHHQ07283 1943 aa10.78□□□□□ -0.68
CD46-214ENST00000480003 KPNA6O60684 536 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 PSAPP07602 524 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 C6orf222P0C671 652 aaPredicted RBP10.77□□□□□ -0.69
CD46-214ENST00000480003 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.69
CD46-214ENST00000480003 MUTP22033 750 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 RPA1P27694 616 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 TCF7P36402 384 aaPredicted RBP10.77□□□□□ -0.69
CD46-214ENST00000480003 CPT1AP50416 773 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 STAT5BP51692 787 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 ECM1Q16610 540 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 DGKDQ16760 1214 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 GNASQ5JWF2 1037 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 HYIQ5T013 277 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 NCAPH2Q6IBW4 605 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 SWSAP1Q6NVH7 229 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 MIS18BP1Q6P0N0 1132 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 SHC4Q6S5L8 630 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 CATSPER3Q86XQ3 398 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.69
CD46-214ENST00000480003 ARRDC4Q8NCT1 418 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 U2AF1L4Q8WU68 220 aaKnown RBP10.77□□□□□ -0.69
CD46-214ENST00000480003 EPSTI1Q96J88 318 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 SMARCAD1Q9H4L7 1026 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 RGL1Q9NZL6 768 aa10.77□□□□□ -0.69
CD46-214ENST00000480003 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 FAM237AA0A1B0GTK4 181 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 A0A1W2PQ27 194 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 A0A1W2PQ64 194 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 A0A1W2PQD8 194 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 PP2D1A8MPX8 630 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 HAS3O00219 553 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 NOP56O00567 594 aaKnown RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 SLC26A4O43511 780 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 CHMP2AO43633 222 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 ZNF862O60290 1169 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 ZEB2O60315 1214 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 MED24O75448 989 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 LYPLA2O95372 231 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 LGALS2P05162 132 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 ASGR1P07306 291 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 XRCC6P12956 609 aaKnown RBP eCLIP10.76□□□□□ -0.69
CD46-214ENST00000480003 CMA1P23946 247 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 PSMC5P62195 406 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 PURAQ00577 322 aaKnown RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 SP4Q02446 784 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 SPECC1Q5M775 1068 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 RNF180Q86T96 592 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 CCDC60Q8IWA6 550 aaPredicted RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 C4orf19Q8IY42 314 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 PNMA5Q96PV4 448 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 TUFT1Q9NNX1 390 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 ZNF302Q9NR11 478 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 WRAP73Q9P2S5 460 aaPredicted RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 GABBR1Q9UBS5 961 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
CD46-214ENST00000480003 HTTP42858 3142 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 EMSYQ7Z589 1322 aa10.76□□□□□ -0.69
CD46-214ENST00000480003 MOXD2PA6NHM9 499 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms