RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	FLRT1	Q9NZU1	646 aa		12.48	□□□□□ -0.41
APTX-223	ENST00000479656	MCM3AP	O60318	1980 aa		12.48	□□□□□ -0.41
APTX-223	ENST00000479656	ARHGEF35	A5YM69	484 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	SMTNL1	A8MU46	457 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ZNF862	O60290	1169 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ADCYAP1R1	P41586	468 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	PSMC4	P43686	418 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	STX17	P56962	302 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ACVR2B	Q13705	512 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	NCAPH	Q15003	741 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	CCL14	Q16627	93 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	HSDL1	Q3SXM5	330 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	PRAMEF19	Q5SWL8	479 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	CCDC65	Q8IXS2	484 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	SEPT1	Q8WYJ6	367 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ATP6V0A1	Q93050	837 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	MED15	Q96RN5	788 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	REEP2	Q9BRK0	252 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ARHGAP39	Q9C0H5	1083 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	ZHX3	Q9H4I2	956 aa		12.47	□□□□□ -0.41
APTX-223	ENST00000479656	DBR1	Q9UK59	544 aa	Known RBP	12.47	□□□□□ -0.41
APTX-223	ENST00000479656	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	RBM47	A0AV96	593 aa	Known RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	SFI1	A8K8P3	1242 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	AP5Z1	O43299	807 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	TRPA1	O75762	1119 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	STBD1	O95210	358 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	HOXC6	P09630	235 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	ERCC5	P28715	1186 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	RGS2	P41220	211 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	RARRES1	P49788	294 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	NPEPPS	P55786	919 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	EHHADH	Q08426	723 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	COASY	Q13057	564 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	GJC2	Q5T442	439 aa	Predicted RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	TRMT44	Q8IYL2	757 aa	Known RBP	12.46	□□□□□ -0.41
APTX-223	ENST00000479656	ADSSL1	Q8N142	457 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	SPATA33	Q96N06	139 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	PCYT2	Q99447	389 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	ABHD16B	Q9H3Z7	469 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	ZNF302	Q9NR11	478 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	TBC1D7	Q9P0N9	293 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	DOCK3	Q8IZD9	2030 aa		12.46	□□□□□ -0.41
APTX-223	ENST00000479656	IGKV6D-21	A0A0A0MT36	114 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	RSPH10B2	B2RC85	870 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	IKBKB	O14920	756 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	DKC1	O60832	514 aa	Known RBP eCLIP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	RSPH10B	P0C881	870 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	ATP4A	P20648	1035 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	TCF7	P36402	384 aa	Predicted RBP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	MAP2K2	P36507	400 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	FCGRT	P55899	365 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	LACTB	P83111	547 aa	Predicted RBP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	MYL5	Q02045	173 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	PSMD2	Q13200	908 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	XKR9	Q5GH70	373 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	PLA2G4F	Q68DD2	849 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	PADI6	Q6TGC4	694 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	ANO5	Q75V66	913 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	OTUD6A	Q7L8S5	288 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	MSL3	Q8N5Y2	521 aa	Known RBP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	KIAA0895	Q8NCT3	520 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	SOCS4	Q8WXH5	440 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	TRIM47	Q96LD4	638 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	GPR20	Q99678	358 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	ANKEF1	Q9NU02	776 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	RNF186	Q9NXI6	227 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	CTNND2	Q9UQB3	1225 aa		12.46	□□□□□ -0.42
APTX-223	ENST00000479656	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.46	□□□□□ -0.42
APTX-223	ENST00000479656	FRMD3	A2A2Y4	597 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	NOP56	O00567	594 aa	Known RBP	12.45	□□□□□ -0.42
APTX-223	ENST00000479656	CYP2C19	P33261	490 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	STAT5B	P51692	787 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	LRRC41	Q15345	812 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	MAEA	Q7L5Y9	396 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	GLIS3	Q8NEA6	775 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	ENOX1	Q8TC92	643 aa	Known RBP	12.45	□□□□□ -0.42
APTX-223	ENST00000479656	NELFB	Q8WX92	580 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	FANCL	Q9NW38	375 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	ZNF236	Q9UL36	1845 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	IGSF9B	Q9UPX0	1349 aa		12.45	□□□□□ -0.42
APTX-223	ENST00000479656	SMPD1	P17405	629 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	PRKCE	Q02156	737 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	SP3	Q02447	781 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	ARHGAP1	Q07960	439 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	LAMC2	Q13753	1193 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	CCDC144B	Q3MJ40	725 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	XKR3	Q5GH77	459 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	FAM26F	Q5R3K3	315 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	IQSEC1	Q6DN90	963 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	ANP32B	Q92688	251 aa	Known RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	CEP170P1	Q96L14	293 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	CCDC43	Q96MW1	224 aa	Known RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	APBA2	Q99767	749 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	FGFBP2	Q9BYJ0	223 aa		12.44	□□□□□ -0.42
APTX-223	ENST00000479656	GTPBP4	Q9BZE4	634 aa	Known RBP	12.44	□□□□□ -0.42
APTX-223	ENST00000479656	HSD3B7	Q9H2F3	369 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms