RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CRYGNQ8WXF5 182 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 SAMD11Q96NU1 681 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 COG5Q9UP83 839 aa16.29■□□□□ 0.2
ATG4B-218ENST00000479554 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 TNFRSF10AO00220 468 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 IPO5O00410 1097 aaKnown RBP16.28■□□□□ 0.2
ATG4B-218ENST00000479554 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 IFNAR1P17181 557 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
ATG4B-218ENST00000479554 NTRK3Q16288 839 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 IER5Q5VY09 327 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 ABHD15Q6UXT9 468 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-218ENST00000479554 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 NCOA5Q9HCD5 579 aaKnown RBP16.28■□□□□ 0.2
ATG4B-218ENST00000479554 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 PCDHA2Q9Y5H9 948 aa16.28■□□□□ 0.2
ATG4B-218ENST00000479554 IGKV6D-21A0A0A0MT36 114 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 EVCP57679 992 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-218ENST00000479554 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 CCDC60Q8IWA6 550 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-218ENST00000479554 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 HLA-CQ95604 372 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 ZNF302Q9NR11 478 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 CYP46A1Q9Y6A2 500 aa16.27■□□□□ 0.2
ATG4B-218ENST00000479554 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
ATG4B-218ENST00000479554 HBP1O60381 514 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 CD52P31358 61 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 KCNQ1P51787 676 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 TMEM62Q0P6H9 643 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 PDXDC2PQ6P474 469 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 MTHFD1LQ6UB35 978 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 ATP8B4Q8TF62 1192 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 AGO3Q9H9G7 860 aaKnown RBP16.26■□□□□ 0.19
ATG4B-218ENST00000479554 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 COL1A2P08123 1366 aa16.26■□□□□ 0.19
ATG4B-218ENST00000479554 ADGRA3Q8IWK6 1321 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 SMIM35A0A1B0GVV1 85 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 BMP1P13497 986 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 NLRP5P59047 1200 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 KRT76Q01546 638 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 PTPROQ16827 1216 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 PRR16Q569H4 304 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 ZNF746Q6NUN9 644 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-218ENST00000479554 SWSAP1Q6NVH7 229 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-218ENST00000479554 NME8Q8N427 588 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 UPF3BQ9BZI7 483 aaKnown RBP16.25■□□□□ 0.19
ATG4B-218ENST00000479554 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 SQORQ9Y6N5 450 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 NLRC5Q86WI3 1866 aa16.25■□□□□ 0.19
ATG4B-218ENST00000479554 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 ENPP3O14638 875 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 CPLX1O14810 134 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 KLRC1P26715 233 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 CIITAP33076 1130 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
ATG4B-218ENST00000479554 PAK2Q13177 524 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 ZNF484Q5JVG2 852 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 LINC01599Q8WXQ3 324 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 MRPL38Q96DV4 380 aaKnown RBP16.24■□□□□ 0.19
ATG4B-218ENST00000479554 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 CELF4Q9BZC1 486 aaKnown RBP16.24■□□□□ 0.19
ATG4B-218ENST00000479554 SH3GLB2Q9NR46 395 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 BDP1A6H8Y1 2624 aa16.24■□□□□ 0.19
ATG4B-218ENST00000479554 KDM3AQ9Y4C1 1321 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 H3BNC9 293 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 PSAPP07602 524 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 CTNNB1P35222 781 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 GPM6BQ13491 265 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 TIGD5Q53EQ6 642 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
ATG4B-218ENST00000479554 LENG9Q96B70 501 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 ZNF274Q96GC6 653 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-218ENST00000479554 RC3H2Q9HBD1 1191 aaKnown RBP16.23■□□□□ 0.19
ATG4B-218ENST00000479554 PADI3Q9ULW8 664 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 SAMM50Q9Y512 469 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 PCDHA10Q9Y5I2 948 aa16.23■□□□□ 0.19
ATG4B-218ENST00000479554 DEXIO95424 95 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 ATP4AP20648 1035 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 STK3Q13188 491 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 BBXQ8WY36 941 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-218ENST00000479554 NECAB3Q96P71 396 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-218ENST00000479554 LARP6Q9BRS8 491 aaKnown RBP16.22■□□□□ 0.19
ATG4B-218ENST00000479554 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
ATG4B-218ENST00000479554 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms